RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PRAMEF1O95521 474 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 PARP15Q460N3 678 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ANKRD22Q5VYY1 191 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 CLEC6AQ6EIG7 209 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 GDF6Q6KF10 455 aaPredicted RBP12.88□□□□□ -0.35
PTPRK-207ENST00000368226 TAF8Q7Z7C8 310 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 LRRC49Q8IUZ0 686 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 SVOPQ8N4V2 548 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
PTPRK-207ENST00000368226 KRT75O95678 551 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CST1P01037 141 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 GABRB2P47870 512 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CHST15Q7LFX5 561 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SETD9Q8NE22 299 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 NFATC1O95644 943 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 GNRH1P01148 92 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 EFNA1P20827 205 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 KCNJ2P63252 427 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 UBXN2BQ14CS0 331 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 FAM171BQ6P995 826 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 HDDC2Q7Z4H3 204 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 METTL3Q86U44 580 aaKnown RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 PHF10Q8WUB8 498 aaKnown RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 AP2M1Q96CW1 435 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CDH19Q9H159 772 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 DPEP2Q9H4A9 486 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ATG13O75143 517 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 KRT36O76013 467 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 INO80DQ53TQ3 878 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 INTS11Q5TA45 600 aaKnown RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 C17orf64Q86WR6 236 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ZCCHC10Q8TBK6 192 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 EVA1BQ9NVM1 165 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SNX3O60493 162 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 VIPP01282 170 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SIDT2Q8NBJ9 832 aaKnown RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CD101Q93033 1021 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SPATA2Q9UM82 520 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 PER2O15055 1255 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ZBTB11O95625 1053 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 PRG2P13727 222 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 NMBRP28336 390 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SPAM1P38567 509 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CLK3P49761 638 aaKnown RBP12.87□□□□□ -0.35
PTPRK-207ENST00000368226 GNA12Q03113 381 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 CCNIQ14094 377 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 SLC10A6Q3KNW5 377 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 BRI3BPQ8WY22 251 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 ESAMQ96AP7 390 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
PTPRK-207ENST00000368226 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ENTPD5O75356 428 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ADSLP30566 484 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 NAE1Q13564 534 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 TXNDC11Q6PKC3 985 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 POTEHQ6S545 545 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF563Q8TA94 476 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 KLHL32Q96NJ5 620 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 EBPLQ9BY08 206 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 PHPT1Q9NRX4 125 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 QSOX1O00391 747 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 SIN3BO75182 1162 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ELF3P78545 371 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 RALGPS2Q86X27 583 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 SMYD1Q8NB12 490 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 GMPPBQ9Y5P6 360 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 CCDC189A1A4V9 331 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 HSPA7P48741 367 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 ADRM1Q16186 407 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 C9orf64Q5T6V5 341 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 C12orf56Q8IXR9 622 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 NFKBIEO00221 500 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 RECQL5O94762 991 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
PTPRK-207ENST00000368226 PTPN2P17706 415 aa12.86□□□□□ -0.35
PTPRK-207ENST00000368226 RXRGP48443 463 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms