RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 DGUOKQ16854 277 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 RALGPS2Q86X27 583 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 PROSER1Q86XN7 944 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PLEKHG4BQ96PX9 1271 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 CLCA2Q9UQC9 943 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PIP5K1BO14986 540 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 XRCC1P18887 633 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 ST13P50502 369 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 YBEYP58557 167 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 ITGADQ13349 1161 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 OR52E6Q96RD3 313 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 ABCG8Q9H221 673 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 LRRC42Q9Y546 428 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 MYH7BA7E2Y1 1941 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 IRAK2O43187 625 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 HLA-DQB2P05538 268 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 HDCP19113 662 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 KRT20P35900 424 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 HPCAL1P37235 193 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 CLDN10P78369 228 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 TOP3AQ13472 1001 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 OR2T12Q8NG77 320 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 SPPL2BQ8TCT7 592 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PLGRKTQ9HBL7 147 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PALMDQ9NP74 551 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 COL18A1P39060 1754 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 TMEM233B4DJY2 109 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 SLC22A2O15244 555 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 SLC7A4O43246 635 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 CES1P23141 567 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 NRG1Q02297 640 aaPredicted RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 LIPEQ05469 1076 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PAFAH1B3Q15102 231 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 GLYATQ6IB77 296 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 ENDOVQ8N8Q3 282 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 OR7D4Q8NG98 312 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 GRIN3AQ8TCU5 1115 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 ELMO1Q92556 727 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PCDHAC1Q9H158 963 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 TRPC4Q9UBN4 977 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 RAI2Q9Y5P3 530 aa11.66□□□□□ -0.54
COPA-202ENST00000368069 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
COPA-202ENST00000368069 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 PRMT5O14744 637 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 LRATO95237 230 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 NDST2P52849 883 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 PFKPQ01813 784 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 TP53BP2Q13625 1128 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 ACOX1Q15067 660 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 CTU1Q7Z7A3 348 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 ZC3HC1Q86WB0 502 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 RBFAQ8N0V3 343 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 HJURPQ8NCD3 748 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 C1orf21Q9H246 121 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 ITGB4P16144 1822 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 COL2A1P02458 1487 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 CLDN11O75508 207 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 PBX3P40426 434 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 MAPK8P45983 427 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 SNRPD1P62314 119 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 RAB6CQ53S08 254 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 ERAP2Q6P179 960 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 RAB6CQ9H0N0 254 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 COQ10BQ9H8M1 238 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 ANKRD36CQ5JPF3 1778 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 STX16-NPEPL1H3BU86 382 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 NRP1O14786 923 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 DLX3O60479 287 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 CATP04040 527 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 HCAR3P49019 387 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 LSM3P62310 102 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 POLR2LP62875 67 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 STARD8Q92502 1023 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 SLC7A6OSQ96CW6 309 aaPredicted RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 NPY6RQ99463 290 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 ZDHHC2Q9UIJ5 367 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 GMPPBQ9Y5P6 360 aa11.65□□□□□ -0.54
COPA-202ENST00000368069 COPG1Q9Y678 874 aaKnown RBP11.65□□□□□ -0.54
COPA-202ENST00000368069 TAF1P21675 1872 aa11.65□□□□□ -0.55
COPA-202ENST00000368069 OR51F1A6NGY5 319 aa11.65□□□□□ -0.55
COPA-202ENST00000368069 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.55
COPA-202ENST00000368069 CCNA2P20248 432 aa11.65□□□□□ -0.55
COPA-202ENST00000368069 FKBP1BP68106 108 aa11.65□□□□□ -0.55
COPA-202ENST00000368069 TSNQ15631 228 aaKnown RBP11.65□□□□□ -0.55
COPA-202ENST00000368069 PABPC1LQ4VXU2 614 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms