RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 DNM1LO00429 736 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DLGAP1O14490 977 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A4P22310 534 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A5P35504 534 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IFI35P80217 286 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FADDQ13158 208 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KDELC1Q6UW63 502 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SEZ6L2Q6UXD5 910 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PIH1D2Q8WWB5 315 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HES6Q96HZ4 224 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PCDH12Q9NPG4 1184 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ENTPD7Q9NQZ7 604 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PPP4R1LQ9P1A2 415 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC2A2P11168 524 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HOXD8P13378 290 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POU2F1P14859 743 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POLR2FP61218 127 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 YWHAGP61981 247 aaKnown RBP eCLIP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POLR3BQ9NW08 1133 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NAGPAQ9UK23 515 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FNDC3AQ9Y2H6 1198 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ADAMTS12P58397 1594 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GPR75-ASB3A0A0A6YYF3 556 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 JUNP05412 331 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NAGLUP54802 743 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SHKBP1Q8TBC3 707 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF564Q8TBZ8 553 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TCEAL4Q96EI5 215 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 S100A13Q99584 98 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NUAK2Q9H093 628 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ADAM22Q9P0K1 906 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HCN3Q9P1Z3 774 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ASB3Q9Y575 518 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SEC24AO95486 1093 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 IFNB1P01574 187 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HLA-EP13747 358 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HSD3B1P14060 373 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HSD3B2P26439 372 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 THOP1P52888 689 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA19Q7Z5L4 167 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ZBED8Q8IZ13 594 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 COL3A1P02461 1466 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 AGAP5A6NIR3 686 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 IFNA10P01566 189 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PRKAR2AP13861 404 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PDHA2P29803 388 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 YWHABP31946 246 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 BDH1Q02338 343 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PTK7Q13308 1070 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HSDL2Q6YN16 418 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HPS6Q86YV9 775 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MS4A15Q8N5U1 240 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 OR14K1Q8NGZ2 314 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NIF3L1Q9GZT8 377 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D13Q9NVG8 400 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 COQ6Q9Y2Z9 468 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TTC26A0AVF1 554 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NPY2RP49146 381 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HPCAP84074 193 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CBX3Q13185 183 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 NFIXQ14938 502 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CRY2Q49AN0 593 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CADM2Q8N3J6 435 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HPSE2Q8WWQ2 592 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 JPH3Q8WXH2 748 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RNF25Q96BH1 459 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PWWP2AQ96N64 755 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FAM205CA6NFA0 338 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RGS13O14921 159 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PALMO75781 387 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL22Q53GT1 634 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ANXA8L1Q5VT79 327 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 FAM13CQ8NE31 585 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CCDC54Q8NEL0 328 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ART4Q93070 314 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 DNAJC1Q96KC8 554 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 ACAT2Q9BWD1 397 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TLR10Q9BXR5 811 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA1683Q9H0B3 1180 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MTF2Q9Y483 593 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 CNTN1Q12860 1018 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TCEAL6Q6IPX3 200 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 EXOC2Q96KP1 924 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 YIPF2Q9BWQ6 316 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 GMPR2Q9P2T1 348 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PFKLP17858 780 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SP140Q13342 867 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HNRNPDQ14103 355 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 SLC29A2Q14542 456 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TEX30Q5JUR7 227 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RBM17Q96I25 401 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TPK1Q9H3S4 243 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 RUBCNLQ9H714 662 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 HEBP1Q9NRV9 189 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 PLD2O14939 933 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 AKAP10O43572 662 aa3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MITFO75030 526 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 MRPL19P49406 292 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 EIF4A1P60842 406 aaKnown RBP3.75□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM32Q13049 653 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms