RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 DHX40Q8IX18 779 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 FTSJ3Q8IY81 847 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 CNPY4Q8N129 248 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZBTB2Q8N680 514 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 MYCT1Q8N699 235 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 USP38Q8NB14 1042 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 LSM14AQ8ND56 463 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 HCAR2Q8TDS4 363 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 PIGTQ969N2 578 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 STAMBPL1Q96FJ0 436 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 METTL2AQ96IZ6 378 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 COG8Q96MW5 612 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 ATOH8Q96SQ7 321 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 PCYT2Q99447 389 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 SH3GL2Q99962 352 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TAOK3Q9H2K8 898 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 NDST4Q9H3R1 872 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TFB2MQ9H5Q4 396 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 PPP1R3EQ9H7J1 279 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 MMP25Q9NPA2 562 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TTC7AQ9ULT0 858 aaPredicted RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 LSM4Q9Y4Z0 139 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 HHLA1C9JL84 531 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNHIT1O43257 154 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 TSPAN3O60637 253 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 IGLV1-44P01699 117 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 GALTP07902 379 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 POLR2CP19387 275 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 AZU1P20160 251 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 DCTP40126 519 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 AMPHP49418 695 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 CLK1P49759 484 aaKnown RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 PAPOLAP51003 745 aaKnown RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 LUMP51884 338 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 IRX1P78414 480 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 PPP2R5BQ15173 497 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 TAF5Q15542 800 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 HIST2H2ACQ16777 129 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 C2orf68Q2NKX9 166 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 TUBB8Q3ZCM7 444 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 HSP90AB4PQ58FF6 505 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 WDR38Q5JTN6 314 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 GGNBP1Q5YKI7 109 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 OR7E24Q6IFN5 339 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 NOTCH2NLQ7Z3S9 236 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 APLFQ8IW19 511 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 SPAG16Q8N0X2 631 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 SPATA6LQ8N4H0 392 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 PCDH20Q8N6Y1 951 aaKnown RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 PLD5Q8N7P1 536 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 OR52I2Q8NH67 350 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 HUS1BQ8NHY5 278 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 SLC38A5Q8WUX1 472 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 RUFY2Q8WXA3 655 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 LINGO1Q96FE5 620 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 SCRN2Q96FV2 425 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 ART5Q96L15 291 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 QRFPRQ96P65 431 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 EGFL8Q99944 293 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 NEURL2Q9BR09 285 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 HINT3Q9NQE9 182 aaKnown RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 BEX4Q9NWD9 120 aaPredicted RBP2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 ERVK-11Q9UQG0 969 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 PRSS21Q9Y6M0 314 aa2.23□□□□□ -2.05
RNU4-42P-201ENST00000364738 A0A0G2JLW4 131 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 IRAK2O43187 625 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 SYNGR3O43761 229 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 PRKNO60260 465 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 CIDEAO60543 219 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TACC1O75410 805 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 CAVIN2O95810 425 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 PRSS56P0CW18 603 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 SHMT1P34896 483 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 CSNK2A1P68400 391 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 EFNB1P98172 346 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 SORDQ00796 357 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 BRD3Q15059 726 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 PDCD2Q16342 344 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMEM35AQ53FP2 167 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 HIST2H2BDQ6DRA6 164 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 DUS1LQ6P1R4 473 aaKnown RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMEM81Q6P7N7 255 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMED8Q6PL24 325 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 CPLX2Q6PUV4 134 aaKnown RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 RAD9BQ6WBX8 426 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 SH2D6Q7Z4S9 175 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 SPICE1Q8N0Z3 855 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 GPATCH11Q8N954 259 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 C11orf65Q8NCR3 313 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 CSNK2A3Q8NEV1 391 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TNIP2Q8NFZ5 429 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 WDR20Q8TBZ3 569 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 NOC3LQ8WTT2 800 aaKnown RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 ANP32BQ92688 251 aaKnown RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF689Q96CS4 500 aaPredicted RBP2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 ELP4Q96EB1 424 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 UBXN6Q9BZV1 441 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 TTYH1Q9H313 450 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms