RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 WNT16Q9UBV4 365 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZNF215Q9UL58 517 aaPredicted RBP4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 MTMR6Q9Y217 621 aa4.29□□□□□ -1.72
RNU6-560P-201ENST00000364007 AGAP14A8MT82 685 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 A8MZ25 164 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 GJB3O75712 270 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 EGFP01133 1207 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 IGHV4-30-4P0DP06 118 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 BDKRB2P30411 391 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 PIK3CAP42336 1068 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 CDH8P55286 799 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 HNRNPH2P55795 449 aaKnown RBP4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 DSCR9P59020 149 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 PRAMEP78395 509 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 CREB5Q02930 508 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 EGR4Q05215 589 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 GRIK2Q13002 908 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 IRF3Q14653 427 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 CRYMQ14894 314 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZSCAN23Q3MJ62 389 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 TMEM198Q66K66 360 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 JADE1Q6IE81 842 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 FASTKD5Q7L8L6 764 aaKnown RBP4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 SGCDQ92629 289 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 ORAI1Q96D31 301 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 LYZL4Q96KX0 146 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 HARBI1Q96MB7 349 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 PCYT2Q99447 389 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 SEPT5Q99719 369 aaPredicted RBP4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 TMEM204Q9BSN7 226 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 LTB4R2Q9NPC1 389 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 COPG2Q9UBF2 871 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 ADD3Q9UEY8 706 aaKnown RBP4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 GPR34Q9UPC5 381 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 CLIC4Q9Y696 253 aa4.28□□□□□ -1.72
RNU6-560P-201ENST00000364007 ATP2A1O14983 1001 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SCAMP1O15126 338 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 HCRTR2O43614 444 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 DDNO94850 711 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 KDM4BO94953 1096 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 KCNK5O95279 499 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 PAPSS2O95340 614 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 FCGR1AP12314 374 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 DDX5P17844 614 aaKnown RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 GABRB1P18505 474 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 RAD23BP54727 409 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 NAP1L1P55209 391 aaKnown RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 MC1RQ01726 317 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 TRAF2Q12933 501 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 CDC16Q13042 620 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 OASLQ15646 514 aaKnown RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 HLFQ16534 295 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 CTF1Q16619 201 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 ASTE1Q2TB18 679 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 DUSP28Q4G0W2 176 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 KCTD18Q6PI47 426 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SDCCAG8Q86SQ7 713 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SPATA2LQ8IUW3 424 aaPredicted RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF34Q8IZ26 560 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SRBD1Q8N5C6 995 aaKnown RBP4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR8K5Q8NH50 307 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 WFIKKN2Q8TEU8 576 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 APBB2Q92870 758 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 EGLN2Q96KS0 407 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 C3orf30Q96M34 536 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR2A14Q96R47 310 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 CMKLR1Q99788 373 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SH3GL2Q99962 352 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 PIGMQ9H3S5 423 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SMARCAD1Q9H4L7 1026 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SYNCQ9H7C4 482 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 MTMR10Q9NXD2 777 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 FBXL17Q9UF56 701 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR14J1Q9UGF5 321 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 VPS28Q9UK41 221 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 NENFQ9UMX5 172 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 NFS1Q9Y697 457 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 SESN1Q9Y6P5 492 aa4.27□□□□□ -1.73
RNU6-560P-201ENST00000364007 LACTBL1A8MY62 500 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 M0QZ24 198 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 MID1O15344 667 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SLC28A2O43868 658 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZBTB11O95625 1053 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SRCP12931 536 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CLNS1AP54105 237 aaKnown RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 NLRP5P59047 1200 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 TAS2R40P59535 323 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 TUBA1BP68363 451 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZXDBP98169 803 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF155Q12901 538 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 DLG1Q12959 904 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms