RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CARD8Q9Y2G2 431 aa1.9□□□□□ -2.11
RNU6-238P-201ENST00000363313 ATRXP46100 2492 aa1.9□□□□□ -2.11
RNU6-238P-201ENST00000363313 IGLV7-46A0A075B6I9 117 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 A6NL46 340 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 SKAP2O75563 359 aaPredicted RBP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 PDE9AO76083 593 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 TNFRSF6BO95407 300 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 CSF1P09603 554 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 CSF2RAP15509 400 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 AGAP20933 346 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 BDKRB2P30411 391 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 AHRP35869 848 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 AK2P54819 239 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 MLLT10P55197 1068 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 RPP30P78346 268 aaKnown RBP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 SPOCK1Q08629 439 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 HLTFQ14527 1009 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 STARD3Q14849 445 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 GLIPR1L2Q4G1C9 344 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 KRTCAP3Q53RY4 240 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 CBWD5Q5RIA9 395 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 ADAMTSL4-AS1Q5T5F5 129 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 ANKRD54Q6NXT1 300 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 BRAT1Q6PJG6 821 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 LMNTD2Q8IXW0 634 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 OR2T6Q8NHC8 308 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 ABHD8Q96I13 439 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 C18orf12Q96KH6 178 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 PKP2Q99959 881 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 CTDSP1Q9GZU7 261 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 BICC1Q9H694 974 aaKnown RBP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 KLHL8Q9P2G9 620 aaPredicted RBP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 TTC7AQ9ULT0 858 aaPredicted RBP1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 CROCCQ5TZA2 2017 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 PTPRCP08575 1304 aa1.89□□□□□ -2.11
RNU6-238P-201ENST00000363313 IGLV3-10A0A075B6K4 115 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 E7EVH7 732 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 TMEM178BH3BS89 294 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 IGHV4-38-2P0DP08 117 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 ETFAP13804 333 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 SLC2A4P14672 509 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 CEBPBP17676 345 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 POLR2CP19387 275 aaPredicted RBP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 ARCN1P48444 511 aaKnown RBP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 RBM5P52756 815 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 ISL1P61371 349 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 KCNJ10P78508 379 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 DLK1P80370 383 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 PDCLQ13371 301 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 MMEL1Q495T6 779 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 TANGO2Q6ICL3 276 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 DOK6Q6PKX4 331 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 FAM198BQ6UWH4 519 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 SLC46A3Q7Z3Q1 461 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 C11orf53Q8IXP5 236 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 OR52I2Q8NH67 350 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 RNFT2Q96EX2 444 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 LINGO1Q96FE5 620 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 CLSTN3Q9BQT9 956 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 KCNN2Q9H2S1 579 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 MMP25Q9NPA2 562 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 OBP2BQ9NPH6 170 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 DACT1Q9NYF0 836 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 SUFUQ9UMX1 484 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 FAM50BQ9Y247 325 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 PYGO1Q9Y3Y4 419 aa1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 SOS1Q07889 1333 aaPredicted RBP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 COL16A1Q07092 1604 aaPredicted RBP1.88□□□□□ -2.11
RNU6-238P-201ENST00000363313 ZNF646O15015 1829 aaPredicted RBP1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 C1orf226A1L170 272 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 TMEM202A6NGA9 273 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 LGALS16A8MUM7 142 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 H0Y3Z8 333 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 CLPTM1O96005 669 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 TSHBP01222 138 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 IGKV3-15P01624 115 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 ITGA3P26006 1051 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 DDIT3P35638 169 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 MAP2K2P36507 400 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 SERPINF1P36955 418 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 GGNBP1Q5YKI7 109 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 FRG2Q64ET8 278 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 OR7E24Q6IFN5 339 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 SYNE3Q6ZMZ3 975 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 SYT13Q7L8C5 426 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 SLC39A11Q8N1S5 342 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 RAB40AQ8WXH6 277 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 RAD21L1Q9H4I0 556 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 MAN1B1Q9UKM7 699 aa1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.87□□□□□ -2.11
RNU6-238P-201ENST00000363313 TDRD15B5MCY1 1934 aaKnown RBP1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 H0YIN7 160 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 APAF1O14727 1248 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 TCEA3O75764 348 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 NFKBIAP25963 317 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 EIF2S3P41091 472 aaKnown RBP1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 PFKFB4Q16877 469 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 LONRF1Q17RB8 773 aa1.86□□□□□ -2.11
RNU6-238P-201ENST00000363313 CCDC96Q2M329 555 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms