RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZNF423Q2M1K9 1284 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 CWF19L1Q69YN2 538 aaKnown RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 PQLC1Q8N2U9 271 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 TRPC7Q9HCX4 862 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 ATP11BQ9Y2G3 1177 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 ARIH1Q9Y4X5 557 aaPredicted RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 OGNP20774 298 aaKnown RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 PMLP29590 882 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 NXNQ6DKJ4 435 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 BNC2Q6ZN30 1099 aaPredicted RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 SDCCAG8Q86SQ7 713 aaPredicted RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 TMEM126BQ8IUX1 230 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 PGAM4Q8N0Y7 254 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 PTERQ96BW5 349 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 ZBED2Q9BTP6 218 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 HERC2P3Q9BVR0 1158 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 ZBTB26Q9HCK0 441 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 ZNF334Q9HCZ1 680 aaPredicted RBP22.57■■□□□ 1.2
LDB1-201ENST00000361198 TNFRSF12AQ9NP84 129 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 STOML2Q9UJZ1 356 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 RAI2Q9Y5P3 530 aa22.57■■□□□ 1.2
LDB1-201ENST00000361198 MZF1P28698 734 aaPredicted RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 ZXDBP98169 803 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 SULT2A1Q06520 285 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 TYSND1Q2T9J0 566 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 HERC6Q8IVU3 1022 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 ST13P4Q8IZP2 240 aaPredicted RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 LPCAT1Q8NF37 534 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 DIS3LQ8TF46 1054 aaKnown RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 CATSPER2Q96P56 530 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 CDRT15Q96T59 188 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 SH3GL3Q99963 347 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 RC3H2Q9HBD1 1191 aaKnown RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 TMEM39AQ9NV64 488 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 PCDH10Q9P2E7 1040 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 FIS1Q9Y3D6 152 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 AP1G1O43747 822 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 TBL1XO60907 577 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 SNUPNO95149 360 aaKnown RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 URODP06132 367 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 CD1DP15813 335 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 PPP3CCP48454 512 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 THOP1P52888 689 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 TAF1AQ15573 450 aaPredicted RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 MMEL1Q495T6 779 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 LIN52Q52LA3 116 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 CARNMT1Q8N4J0 409 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 MAELQ96JY0 434 aaKnown RBP22.56■■□□□ 1.2
LDB1-201ENST00000361198 INSL5Q9Y5Q6 135 aa22.56■■□□□ 1.2
LDB1-201ENST00000361198 H0Y626 953 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 TMCC1O94876 653 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 SLC22A9Q8IVM8 553 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 PIP4K2CQ8TBX8 421 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 ADAMTS19Q8TE59 1207 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 MARK4Q96L34 752 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 AARSD1Q9BTE6 412 aaKnown RBP22.55■■□□□ 1.2
LDB1-201ENST00000361198 PLXNA4Q9HCM2 1894 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 ZNF37AP17032 561 aaPredicted RBP22.55■■□□□ 1.2
LDB1-201ENST00000361198 SUOXP51687 545 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 TXNDC8Q6A555 127 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 ZFP1Q6P2D0 407 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 TCEAL8Q8IYN2 117 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 RYBPQ8N488 228 aaPredicted RBP22.55■■□□□ 1.2
LDB1-201ENST00000361198 ARL14EPQ8N8R7 260 aaPredicted RBP22.55■■□□□ 1.2
LDB1-201ENST00000361198 ICA1LQ8NDH6 482 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 RCN3Q96D15 328 aa22.55■■□□□ 1.2
LDB1-201ENST00000361198 POLR3BQ9NW08 1133 aaPredicted RBP22.55■■□□□ 1.2
LDB1-201ENST00000361198 SDHDO14521 159 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 GREM1O60565 184 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 SPATA31D3P0C874 917 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 CES1P23141 567 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 CALRP27797 417 aaKnown RBP22.54■■□□□ 1.2
LDB1-201ENST00000361198 EPHB3P54753 998 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 TRAF2Q12933 501 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 PTPRRQ15256 657 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 SPATA31D4Q6ZUB0 917 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 CUZD1Q86UP6 607 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 NCSTNQ92542 709 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 CENPKQ9BS16 269 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 SPATA16Q9BXB7 569 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 GSTO2Q9H4Y5 243 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 BCAP29Q9UHQ4 241 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 PACSIN3Q9UKS6 424 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 UBA6A0AVT1 1052 aaPredicted RBP22.54■■□□□ 1.2
LDB1-201ENST00000361198 TRPC5OSA6NMA1 111 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 C2orf81A6NN90 581 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 ANKRD66B4E2M5 251 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 HOXB8P17481 243 aaPredicted RBP22.54■■□□□ 1.2
LDB1-201ENST00000361198 IMPDH1P20839 514 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 FOLH1Q04609 750 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 PDK3Q15120 406 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 C11orf91Q3C1V1 193 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 GRAMD1BQ3KR37 738 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 UGT2A3Q6UWM9 527 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 TTC16Q8NEE8 873 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 EFCAB1Q9HAE3 211 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 EML4Q9HC35 981 aaKnown RBP22.54■■□□□ 1.2
LDB1-201ENST00000361198 INTS10Q9NVR2 710 aaKnown RBP22.54■■□□□ 1.2
LDB1-201ENST00000361198 SPG21Q9NZD8 308 aa22.54■■□□□ 1.2
LDB1-201ENST00000361198 DTNAQ9Y4J8 743 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms