RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NAA20P61599 178 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 HERVK_113P63132 956 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 ZXDBP98169 803 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 SLC25A3Q00325 362 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 RAD51Q06609 339 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 CUL3Q13618 768 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 ZNF678Q5SXM1 525 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 ARMC12Q5T9G4 340 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 LILRA6Q6PI73 481 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 CUZD1Q86UP6 607 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 ACTRT2Q8TDY3 377 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 PTERQ96BW5 349 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 PHF21BQ96EK2 531 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 C19orf43Q9BQ61 176 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 ERVK-6Q9BXR3 956 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 DERL2Q9GZP9 239 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 GSTO2Q9H4Y5 243 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 MAGEE1Q9HCI5 957 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 IL23AQ9NPF7 189 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 KIAA1522Q9P206 1035 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 CFAP97Q9P2B7 532 aa18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 FCF1Q9Y324 198 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-203ENST00000359895 A0A088AWK7 358 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 LCHNA4D1U4 455 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 H0Y3Z8 333 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 SDHDO14521 159 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 VPS26AO75436 327 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 CXCL14O95715 111 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 EN2P19622 333 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 GTF2A1P52655 376 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 CCDC6Q16204 474 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 STK40Q8N2I9 435 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 NKAPQ8N5F7 415 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 WFDC5Q8TCV5 224 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 KIAA1191Q96A73 305 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 MYO19Q96H55 970 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 LENG8Q96PV6 779 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 MEAF6Q9HAF1 191 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 SLC7A8Q9UHI5 535 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 FKBPLQ9UIM3 349 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 PKP3Q9Y446 797 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 ZNF711Q9Y462 761 aa18.24■□□□□ 0.51
PDLIM7-203ENST00000359895 SCN8AQ9UQD0 1980 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 LOC100653049A0A140TA62 436 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 SCAMP3O14828 347 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 CCNT2O60583 730 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 KRT34O76011 436 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 PGLSO95336 258 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 C8AP07357 584 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 PKMP14618 531 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 PLK1P53350 603 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 INHBCP55103 352 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 ACTR3P61158 418 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 BTKQ06187 659 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 RCN1Q15293 331 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 ACCSLQ4AC99 568 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 ZRANB3Q5FWF4 1079 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 RYBPQ8N488 228 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 KREMEN2Q8NCW0 462 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 FIBINQ8TAL6 211 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 STAG3L4Q8TBR4 150 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 ZBED2Q9BTP6 218 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 STX18Q9P2W9 335 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 TMCO1Q9UM00 188 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 PCDHB9Q9Y5E1 797 aa18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 OAS3Q9Y6K5 1087 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-203ENST00000359895 KERAO60938 352 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 SUPT7LO94864 414 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 CYBBP04839 570 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 PRSS56P0CW18 603 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 ITGAXP20702 1163 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 KCNC1P48547 511 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 ADARP55265 1226 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 CACNG1Q06432 222 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 CYLC2Q14093 348 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 PTPRNQ16849 979 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 UNC50Q53HI1 259 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 ATXN7L2Q5T6C5 722 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 C1orf146Q5VVC0 180 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 C16orf89Q6UX73 402 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 RIPOR1Q6ZS17 1223 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 OTOP2Q7RTS6 562 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 NECAB2Q7Z6G3 386 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 APCDD1Q8J025 514 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 SH3RF2Q8TEC5 729 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 CATSPER2Q96P56 530 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 ATOH8Q96SQ7 321 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 EMILIN2Q9BXX0 1053 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 GPR63Q9BZJ6 419 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 NDE1Q9NXR1 346 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 IL17CQ9P0M4 197 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 TRAF6Q9Y4K3 522 aa18.22■□□□□ 0.51
PDLIM7-203ENST00000359895 GOLGA8CPA6NN73 597 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms