RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 WBP4O75554 376 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 TPP2P29144 1249 aaPredicted RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 HNF4AP41235 474 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DPYSL2Q16555 572 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 RFX4Q33E94 735 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 CWF19L1Q69YN2 538 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 SLC39A4Q6P5W5 647 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 FBXL19Q6PCT2 694 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 RD3Q7Z3Z2 195 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 RBFAQ8N0V3 343 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 PHF10Q8WUB8 498 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 NAT14Q8WUY8 206 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 PTCD2Q8WV60 388 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 OSBPL6Q9BZF3 934 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 KLHL1Q9NR64 748 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 ATP6V1HQ9UI12 483 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 NDST3O95803 873 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 EPORP19235 508 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 ADSLP30566 484 aaPredicted RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 CLCNKBP51801 687 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 DAOAP59103 153 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 LIPEQ05469 1076 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 SIM2Q14190 667 aaPredicted RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 ZNF513Q8N8E2 541 aaPredicted RBP13.7□□□□□ -0.22
VCP-201ENST00000358901 CNTN6Q9UQ52 1028 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 MYH2Q9UKX2 1941 aa13.7□□□□□ -0.22
VCP-201ENST00000358901 G3V2T6 193 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 AMHP03971 560 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 CHRNA4P43681 627 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 PURAQ00577 322 aaKnown RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 ABRQ12979 859 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 MFSD4BQ5TF39 518 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 CHMP1BQ7LBR1 199 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 PROSER1Q86XN7 944 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 GALNT8Q9NY28 637 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 PLK2Q9NYY3 685 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 GMIPQ9P107 970 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 AQP1P29972 269 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 MAGEA10P43363 369 aaPredicted RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 POLR2JP52435 117 aaKnown RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 JAG1P78504 1218 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 USP39Q53GS9 565 aaKnown RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 IL23RQ5VWK5 629 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 ESAMQ96AP7 390 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 APOLD1Q96LR9 279 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 NDEL1Q9GZM8 345 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SPRTNQ9H040 489 aaPredicted RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 CNTRLQ7Z7A1 2325 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 MATN3O15232 486 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 ITM2AO43736 263 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 GNPDA1P46926 289 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 LPIN1Q14693 890 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SOWAHAQ2M3V2 549 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 IGSF9Q9P2J2 1179 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 TCF3P15923 654 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 RHOQP17081 205 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 POLR2EP19388 210 aaKnown RBP13.69□□□□□ -0.22
VCP-201ENST00000358901 JAK1P23458 1154 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 PRDX6P30041 224 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 OR1D2P34982 312 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SLC18A1P54219 525 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 CLCQ05315 142 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SLC9B1Q4ZJI4 515 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 HDDC2Q7Z4H3 204 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 SATL1Q86VE3 508 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 ITCHQ96J02 903 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 KCNE2Q9Y6J6 123 aa13.69□□□□□ -0.22
VCP-201ENST00000358901 CENPXA8MT69 81 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 F7P08709 466 aaPredicted RBP13.68□□□□□ -0.22
VCP-201ENST00000358901 ITGA1P56199 1179 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 LCP2Q13094 533 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 ACAP2Q15057 778 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 REP15Q6BDI9 236 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 NELL1Q92832 810 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 DNAJC1Q96KC8 554 aaKnown RBP13.68□□□□□ -0.22
VCP-201ENST00000358901 TSPAN18Q96SJ8 248 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 SLC9A7Q96T83 725 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
VCP-201ENST00000358901 RASSF1Q9NS23 344 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 SMPD3Q9NY59 655 aaPredicted RBP13.68□□□□□ -0.22
VCP-201ENST00000358901 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 FZD10Q9ULW2 581 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 SPATA2Q9UM82 520 aa13.68□□□□□ -0.22
VCP-201ENST00000358901 COL1A1P02452 1464 aaPredicted RBP13.68□□□□□ -0.22
VCP-201ENST00000358901 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms