RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 HOMER2Q9NSB8 354 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 STAU2Q9NUL3 570 aaKnown RBP eCLIP4□□□□□ -1.77
CNGA1-201ENST00000358519 TMEM39AQ9NV64 488 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 SUCOQ9UBS9 1254 aaKnown RBP4□□□□□ -1.77
CNGA1-201ENST00000358519 HMGXB4Q9UGU5 601 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 ZNF229Q9UJW7 825 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 UGT2A1Q9Y4X1 527 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 SNX13Q9Y5W8 968 aa4□□□□□ -1.77
CNGA1-201ENST00000358519 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TCRBV9S1A1TA0A576 114 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 C9IYK1 514 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ENPP3O14638 875 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ACOT8O14734 319 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GPR32O75388 356 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 RFPL2O75678 378 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 NADKO95544 446 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 IFNB1P01574 187 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 HLA-DRAP01903 254 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CAPN1P07384 714 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SMIM10L2AP0DMW4 78 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SMIM10L2BP0DMW5 78 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 MYL4P12829 197 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 INSRRP14616 1297 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CKMT2P17540 419 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PRKACAP17612 351 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CD58P19256 250 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TCN1P20061 433 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ACO1P21399 889 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ME2P23368 584 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GJC1P36383 396 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GPD2P43304 727 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PTPN9P43378 593 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 NSFP46459 744 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 LEPRP48357 1165 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PPP3CCP48454 512 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 HCAR3P49019 387 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 FAM189BP81408 668 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GALK2Q01415 458 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 FMO1Q01740 532 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CNTN2Q02246 1040 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 NRG1Q02297 640 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TLE2Q04725 743 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 KLF10Q13118 480 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CLN3Q13286 438 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 STK11Q15831 433 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TAZQ16635 292 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 BBS9Q3SYG4 887 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 MTX3Q5HYI7 312 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SNAP47Q5SQN1 464 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GJC2Q5T442 439 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TTC39BQ5VTQ0 682 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ANKRD22Q5VYY1 191 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ZCCHC8Q6NZY4 707 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SLC39A4Q6P5W5 647 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 LCLAT1Q6UWP7 414 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 C16orf89Q6UX73 402 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 IDO2Q6ZQW0 420 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PRR23BQ6ZRT6 265 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ZBTB49Q6ZSB9 765 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 KIAA0408Q6ZU52 694 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PIWIL3Q7Z3Z3 882 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PTAR1Q7Z6K3 402 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ARMC8Q8IUR7 673 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ARHGEF19Q8IW93 802 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CCDC28AQ8IWP9 274 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 RHOT1Q8IXI2 618 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TMEM199Q8N511 208 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 BPIFB6Q8NFQ5 453 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 OR13F1Q8NGS4 319 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 RASSF5Q8WWW0 418 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 DDX1Q92499 740 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CNDP2Q96KP4 475 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GLT1D1Q96MS3 346 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PSKH2Q96QS6 385 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TUBA1CQ9BQE3 449 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 EFHD1Q9BUP0 239 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ZNF717Q9BY31 904 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 CDT1Q9H211 546 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 NOL11Q9H8H0 719 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GPN2Q9H9Y4 310 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 AKIP1Q9NQ31 210 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GIMAP4Q9NUV9 329 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 PNPOQ9NVS9 261 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SMOXQ9NWM0 555 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 ABI2Q9NYB9 513 aaPredicted RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 STMN3Q9NZ72 180 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 GMIPQ9P107 970 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 IPO11Q9UI26 975 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 KLF15Q9UIH9 416 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 VPS28Q9UK41 221 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TCAF1Q9Y4C2 921 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TESMINQ9Y4I5 508 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 DGKBQ9Y6T7 804 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 TDRD15B5MCY1 1934 aaKnown RBP3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SMCHD1A6NHR9 2005 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 E7ESA3 106 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 STX16-NPEPL1H3BU86 382 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 hCG_2039718K7EN88 272 aa3.99□□□□□ -1.77
CNGA1-201ENST00000358519 SGK1O00141 431 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms