RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 NME7Q9Y5B8 376 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 PCDHB5Q9Y5E4 795 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 TCAF2A6NFQ2 919 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 H3BNX3 289 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 MAN1A2O60476 641 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SH3BGRLO75368 114 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SEC22BO75396 215 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 KCNE1P15382 129 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CD1EP15812 388 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 GRIA2P42262 883 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 RPS9P46781 194 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC11A2P49281 568 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 AFF1P51825 1210 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 HPCAP84074 193 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CACHD1Q5VU97 1274 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 MFSD14CQ5VZR4 134 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 GLYATQ6IB77 296 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 GCNT7Q6ZNI0 430 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 GPRIN3Q6ZVF9 776 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 C14orf80Q86SX3 495 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 MICU2Q8IYU8 434 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CLHC1Q8NHS4 586 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 FAM120BQ96EK7 910 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 CENPNQ96H22 339 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 PRICKLE1Q96MT3 831 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 SLC29A1Q99808 456 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 WDR6Q9NNW5 1121 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 ZDHHC7Q9NXF8 308 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 SMPD3Q9NY59 655 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 UBA2Q9UBT2 640 aaPredicted RBP6.82□□□□□ -1.32
RTN4-203ENST00000357376 DAPK2Q9UIK4 370 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 DGKBQ9Y6T7 804 aa6.82□□□□□ -1.32
RTN4-203ENST00000357376 CCDC162PA2VCL2 907 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 BBIP1A8MTZ0 92 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 DENRO43583 198 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 SNAP91O60641 907 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 TFAP2AP05549 437 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 IMPDH1P20839 514 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 HCAR3P49019 387 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 PSMD7P51665 324 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 DIO3P55073 304 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 MTPNP58546 118 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 TNK2Q07912 1038 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 MERTKQ12866 999 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 HNRNPDQ14103 355 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 PAQR3Q6TCH7 311 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 IFNLR1Q8IU57 520 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 C8orf59Q8N0T1 100 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 SEPT8Q92599 483 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ACTR8Q9H981 624 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 TLR8Q9NR97 1041 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 VPS45Q9NRW7 570 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ZNHIT2Q9UHR6 403 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 EIF2B4Q9UI10 523 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 VPS9D1Q9Y2B5 631 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 POLR3HQ9Y535 204 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 IQCA1LA6NCM1 817 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ARPC2O15144 300 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 GPR32O75388 356 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 OR4F21O95013 312 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 IGFBP6P24592 240 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 TPP2P29144 1249 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 HERVK_113P63132 956 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 LCP2Q13094 533 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 NR1D2Q14995 579 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CCL14Q16627 93 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ZNF792Q3KQV3 632 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 TECRLQ5HYJ1 363 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 MARCH8Q5T0T0 291 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 KCTD8Q6ZWB6 473 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 SAPCD2Q86UD0 394 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 HORMAD1Q86X24 394 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 SFRP1Q8N474 314 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CARNMT1Q8N4J0 409 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 NPLOC4Q8TAT6 608 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ANKRD49Q8WVL7 239 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ERVK-6Q9BXR3 956 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 RIBC2Q9H4K1 309 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 PARVBQ9HBI1 364 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 VPS28Q9UK41 221 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 HEMK1Q9Y5R4 338 aaPredicted RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 DNAJC25-GNG10A0A024R161 153 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CFAP99D6REC4 459 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CNTN5O94779 1100 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CST1P01037 141 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CNPP09543 421 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 TFPTP0C1Z6 253 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 CCNA2P20248 432 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 GABRB3P28472 473 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 RPL9P32969 192 aaKnown RBP6.81□□□□□ -1.32
RTN4-203ENST00000357376 GGT5P36269 586 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 STT3AP46977 705 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 POLD2P49005 469 aa6.81□□□□□ -1.32
RTN4-203ENST00000357376 ENTPD1P49961 510 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms