RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZCCHC12Q6PEW1 402 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 LZTR1Q8N653 840 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 PRICKLE1Q96MT3 831 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 HEPHQ9BQS7 1158 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 POU2F3Q9UKI9 436 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RPTORQ8N122 1335 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NEO1Q92859 1461 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 LRRC72A6NJI9 287 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RPL19P84098 196 aaKnown RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NAE1Q13564 534 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SSX6Q7RTT6 188 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RBM18Q96H35 190 aaKnown RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 DPYSL5Q9BPU6 564 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RRN3Q9NYV6 651 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CORO2BQ9UQ03 480 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 USP42Q9H9J4 1324 aaKnown RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CPED1A4D0V7 1026 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NFASCO94856 1347 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 METTL18O95568 372 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RBL1P28749 1068 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CLCN7P51798 805 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SP3Q02447 781 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SYNPOQ8N3V7 929 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 DNAJA4Q8WW22 397 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 EXOSC8Q96B26 276 aaKnown RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ZYG11BQ9C0D3 744 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 OR51V1Q9H2C8 321 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ERVK-18Q9QC07 812 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 E7ENQ6 273 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 AP2A2O94973 939 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SRCP12931 536 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF823P16415 610 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CCINQ13939 588 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 ABCA11PQ4W5N1 156 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 FBXO25Q8TCJ0 367 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NDUFA13Q9P0J0 144 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 NOMO2Q5JPE7 1267 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 RNF43Q68DV7 783 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 C7orf61Q8IZ16 206 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 SEMA3GQ9NS98 782 aa17.23■□□□□ 0.35
COL27A1-201ENST00000356083 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 NDUFA9Q16795 377 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 HKDC1Q2TB90 917 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 UBAP2Q5T6F2 1119 aaKnown RBP17.22■□□□□ 0.35
COL27A1-201ENST00000356083 HECTD2Q5U5R9 776 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 NEPROQ6NW34 567 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 THAP5Q7Z6K1 395 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C17orf64Q86WR6 236 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF518BQ9C0D4 1074 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 PCDHGA6Q9Y5G7 932 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 FSBPO95073 299 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 OAZ2O95190 189 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 RFT1Q96AA3 541 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 TAPBPLQ9BX59 468 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 S100A2P29034 98 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 SCN1BQ07699 218 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 SNAPC1Q16533 368 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 AP1S3Q96PC3 154 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C15orf38-AP3S2A0A0A6YYH1 394 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 ENPP3O14638 875 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 MLYCDO95822 493 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 MSX2P35548 267 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-201ENST00000356083 EIF1AXP47813 144 aaKnown RBP17.22■□□□□ 0.35
COL27A1-201ENST00000356083 NAGLUP54802 743 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C2orf80Q0P641 193 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 HSDL2Q6YN16 418 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 ZSCAN1Q8NBB4 408 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C5orf51A6NDU8 294 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 MIPP30301 263 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 CASRP41180 1078 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 TUBB3Q13509 450 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 ZNF567Q8N184 647 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 C7orf57Q8NEG2 295 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 SNRPB2P08579 225 aaKnown RBP17.22■□□□□ 0.35
COL27A1-201ENST00000356083 ZFP1Q6P2D0 407 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 NUP54Q7Z3B4 507 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 DEPDC4Q8N2C3 294 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 FNIP1Q8TF40 1166 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 BTBD10Q9BSF8 475 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 CCDC86Q9H6F5 360 aaKnown RBP17.22■□□□□ 0.35
COL27A1-201ENST00000356083 NCDNQ9UBB6 729 aa17.22■□□□□ 0.35
COL27A1-201ENST00000356083 RGSL1A5PLK6 1076 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 RGS10O43665 173 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 TFEBP19484 476 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 ADAM8P78325 824 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 SP2Q02086 613 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms