RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTCD2Q8WV60 388 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PPM1MQ96MI6 270 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 GFM1Q96RP9 751 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC39A8Q9C0K1 460 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SUCOQ9UBS9 1254 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 FABP12A6NFH5 140 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZW10O43264 779 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 MAZP56270 477 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TRPV3Q8NET8 790 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 HSPBAP1Q96EW2 488 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PCDHB18PQ96TA0 734 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 LGMNQ99538 433 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 A0A088AWK7 358 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TOR1BO14657 336 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 GOT1P17174 413 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF10P21506 573 aaPredicted RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTX3P26022 381 aaPredicted RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AXLP30530 894 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AIF1P55008 147 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 VBP1P61758 197 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AQP12AQ8IXF9 295 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TWIST2Q8WVJ9 160 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ELMO1Q92556 727 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PORCNQ9H237 461 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PSMD10O75832 226 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 NOL4O94818 638 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TGFB2P61812 414 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 CYP4F8P98187 520 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 TRIT1Q9H3H1 467 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 ANKHQ9HCJ1 492 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 STOX2Q9P2F5 926 aaPredicted RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 AASSQ9UDR5 926 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTBP2Q9UKA9 531 aaKnown RBP12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
SYNCRIP-201ENST00000355238 SH3BGRLO75368 114 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 LIMK2P53671 638 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 MPP1Q00013 466 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ANKRA2Q9H9E1 313 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 MED11Q9P086 117 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF24P17028 368 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CYP1B1Q16678 543 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 TTC29Q8NA56 475 aaPredicted RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 PCDH18Q9HCL0 1135 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC35C2Q9NQQ7 365 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 PAK6Q9NQU5 681 aaPredicted RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 AGRPO00253 132 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 TNFRSF11BO00300 401 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 PGLSO95336 258 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 HLA-DQA2P01906 255 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 C8BP07358 591 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 EML3Q32P44 896 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 DEF8Q6ZN54 512 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 SPAG16Q8N0X2 631 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCDC115Q96NT0 180 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCDC3Q9BQI4 270 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 FADS2P1A8MWK0 482 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 H3BSA7 217 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 UGT2B17O75795 530 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 PENKP01210 267 aaPredicted RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 CKMP06732 381 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 MNDAP41218 407 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 RORCP51449 518 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 BNIP3Q12983 259 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 C6orf89Q6UWU4 347 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 C1orf21Q9H246 121 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 LHX5Q9H2C1 402 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 C12orf65Q9H3J6 166 aaKnown RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ADAMDEC1O15204 470 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 NPHS1O60500 1241 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 MTA2O94776 668 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 SHMT1P34896 483 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 MAGEA8P43361 318 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 DRICH1Q6PGQ1 229 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms