RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GFAPP14136 432 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF23P17027 643 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 ACADVLP49748 655 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 FUT11Q495W5 492 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 TFAP2CQ92754 450 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 RMND5BQ96G75 393 aaPredicted RBP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 ZYG11BQ9C0D3 744 aa18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTP4A3-202ENST00000349124 ANKRD12Q6UB98 2062 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 A0A0U1RQS6 177 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 FDXRP22570 491 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 SLC6A2P23975 617 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PPP4R4Q6NUP7 873 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 ERMP1Q7Z2K6 904 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CMTR2Q8IYT2 770 aaKnown RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 ATAD1Q8NBU5 361 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 NSMCE3Q96MG7 304 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 SERPINB11Q96P15 392 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CYP2S1Q96SQ9 504 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 POLG2Q9UHN1 485 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 V9GYQ6 96 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 TMX2-CTNND1H3BSU7 103 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 ENPP3O14638 875 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PAPSS2O95340 614 aaPredicted RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 GLP2RO95838 553 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CDKN1CP49918 316 aaPredicted RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 AGTR2P50052 363 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 TUSC3Q13454 348 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PLA2G4EQ3MJ16 856 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PAQR3Q6TCH7 311 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CPNE9Q8IYJ1 553 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PCYOX1LQ8NBM8 494 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 DUS3LQ96G46 650 aaKnown RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 TRMOQ9BU70 441 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 EFHD1Q9BUP0 239 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 CCM2LQ9NUG4 571 aaPredicted RBP18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 PHF24Q9UPV7 400 aa18.05■□□□□ 0.48
PTP4A3-202ENST00000349124 LOC285095A0A1B0GVY8 99 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 UBA6A0AVT1 1052 aaPredicted RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 GPR182O15218 404 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 FOXD2O60548 495 aaPredicted RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TMCC1O94876 653 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 BMP2P12643 396 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF37AP17032 561 aaPredicted RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 RHOQP17081 205 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ALDH3B2P48448 385 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 CTBSQ01459 385 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 PTPRRQ15256 657 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TMEM259Q4ZIN3 620 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 LPCAT2Q7L5N7 544 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 CFAP52Q8N1V2 620 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 MIER2Q8N344 545 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ZNF786Q8N393 782 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ANKFN1Q8N957 763 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 FAM81AQ8TBF8 368 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ACOX2Q99424 681 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TLR6Q9Y2C9 796 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 FNDC3AQ9Y2H6 1198 aaKnown RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 DHRS12A0PJE2 317 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 WASH4PA8MWX3 477 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ANGPT2O15123 496 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 EEF1DP29692 281 aaKnown RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 FMO4P31512 558 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 POLD3Q15054 466 aaPredicted RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 RPS6KA2Q15349 733 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 SETMARQ53H47 684 aaPredicted RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 RIN3Q8TB24 985 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 GAB3Q8WWW8 586 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 LRRC58Q96CX6 371 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TMEM74Q96NL1 305 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ATOH8Q96SQ7 321 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TCF12Q99081 682 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 TRIM62Q9BVG3 475 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 ANKRD60Q9BZ19 345 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 PNPLA3Q9NST1 481 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 RSL24D1Q9UHA3 163 aaKnown RBP18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 NDUFAF1Q9Y375 327 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 CROCCQ5TZA2 2017 aa18.04■□□□□ 0.48
PTP4A3-202ENST00000349124 A0A0U1RQF3 1178 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 H0YJX3 145 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 CDC7O00311 574 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 CASP2P42575 452 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 HPCAP84074 193 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 PAGE3Q5JUK9 113 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 HACD2Q6Y1H2 254 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 LRRC49Q8IUZ0 686 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 DRAXINQ8NBI3 349 aaPredicted RBP18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 FBXL20Q96IG2 436 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 PPP1R2P1Q96PQ5 205 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 ARMC1Q9NVT9 282 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 TMEM248Q9NWD8 314 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 PADI4Q9UM07 663 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 OAZ3Q9UMX2 235 aa18.03■□□□□ 0.48
PTP4A3-202ENST00000349124 A0A0D9SEW6 157 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms