RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 ANAPC2Q9UJX6 822 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 VANGL2Q9ULK5 521 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 EIF3LQ9Y262 564 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 PPP2R3BQ9Y5P8 575 aa10.32□□□□□ -0.76
CHRNA1-202ENST00000348749 EVPLQ92817 2033 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 MFSD11O43934 449 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 DAB1O75553 588 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 UPK1BO75841 260 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GABBR2O75899 941 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ALX3O95076 343 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 IQCF3P0C7M6 154 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GOT1P17174 413 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PCMT1P22061 227 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GPX3P22352 226 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 HCAR3P49019 387 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ALDH7A1P49419 539 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ALDH3A2P51648 485 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 KPNA2P52292 529 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 NKX2-5P52952 324 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GP2P55259 537 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 STX1BP61266 288 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 GALNT1Q10472 559 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PRPSAP1Q14558 356 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 USP10Q14694 798 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PPP1R3AQ16821 1122 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 UGP2Q16851 508 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 DPY19L1Q2PZI1 675 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PRR23CQ6ZRP0 262 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PRSS48Q7RTY5 328 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ACOT1Q86TX2 421 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 LYSMD2Q8IV50 215 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 C8orf59Q8N0T1 100 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 CCDC185Q8N715 623 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 TXNDC5Q8NBS9 432 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 RHOXF1Q8NHV9 184 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 RNF139Q8WU17 664 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ATL1Q8WXF7 558 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 NT5C3BQ969T7 300 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 LGMNQ99538 433 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 BDH2Q9BUT1 245 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 BTBD2Q9BX70 525 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 EMILIN2Q9BXX0 1053 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 NOL6Q9H6R4 1146 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PCDH12Q9NPG4 1184 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 CMTM6Q9NX76 183 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ERAP1Q9NZ08 941 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 TBC1D14Q9P2M4 693 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 ANGPTL3Q9Y5C1 460 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 PCDHGA3Q9Y5H0 932 aa10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 FNDC1Q4ZHG4 1894 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-202ENST00000348749 A6NL46 340 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TTC34A8MYJ7 566 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 M0R3G1 203 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 FXYD1O00168 92 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TOR1BO14657 336 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 IDH3BO43837 385 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NDUFS2O75306 463 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NADKO95544 446 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC25A27O95847 323 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 F7P08709 466 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 THRBP10828 461 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CDH1P12830 882 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ATP5F1P24539 256 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CLCN3P51790 818 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 GTF2A2P52657 109 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ARSFP54793 590 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CRY1Q16526 586 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 COQ5Q5HYK3 327 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 C6orf141Q5SZD1 244 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 KCTD11Q693B1 232 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TUBA3EQ6PEY2 450 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TBPL2Q6SJ96 375 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ADCK1Q86TW2 530 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 KIF12Q96FN5 646 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 AURKBQ96GD4 344 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SPATA33Q96N06 139 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SNX18Q96RF0 628 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC30A3Q99726 388 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 RNF38Q9H0F5 515 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ADNPQ9H2P0 1102 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 POMKQ9H5K3 350 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CHRAC1Q9NRG0 131 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 IARS2Q9NSE4 1012 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PDE10AQ9Y233 779 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TMA7Q9Y2S6 64 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ACOT9Q9Y305 439 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms