RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 MAPRE3Q9UPY8 281 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 NR2E1Q9Y466 385 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 RNASEH2AO75792 299 aaKnown RBP18.58■□□□□ 0.57
UBE3C-201ENST00000348165 EOMESO95936 686 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 MPP1Q00013 466 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 DGCR6Q14129 220 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 FBXW8Q8N3Y1 598 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 DCBLD1Q8N8Z6 715 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 CLHC1Q8NHS4 586 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 TIFAQ96CG3 184 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 GPR21Q99679 349 aa18.58■□□□□ 0.57
UBE3C-201ENST00000348165 RFXANKO14593 260 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 WARSP23381 471 aaKnown RBP18.58■□□□□ 0.56
UBE3C-201ENST00000348165 PSMG2Q969U7 264 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 CIDEBQ9UHD4 219 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 ATP6V1HQ9UI12 483 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 FCF1Q9Y324 198 aaKnown RBP18.58■□□□□ 0.56
UBE3C-201ENST00000348165 PLLPQ9Y342 182 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 ATRNL1Q5VV63 1379 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 BCL10O95999 233 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 GRM3Q14832 879 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 AARSD1Q9BTE6 412 aaKnown RBP18.58■□□□□ 0.56
UBE3C-201ENST00000348165 SDCBP2Q9H190 292 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 EGFL7Q9UHF1 273 aa18.58■□□□□ 0.56
UBE3C-201ENST00000348165 PRR5-ARHGAP8B1AHC4 643 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 NFATC1O95644 943 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 FGF19O95750 216 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 GNRH1P01148 92 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ASPAP45381 313 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 CYP4F2P78329 520 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 JAG1P78504 1218 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ARHGAP8P85298 464 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 NRG1Q02297 640 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 SOWAHAQ2M3V2 549 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 INO80DQ53TQ3 878 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 B3GNT6Q6ZMB0 384 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 PTCD3Q96EY7 689 aaKnown RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TCF25Q9BQ70 676 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 SLC25A51Q9H1U9 297 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TXNRD2Q9NNW7 524 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TUBA8Q9NY65 449 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 HMGXB4Q9UGU5 601 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 POLR3HQ9Y535 204 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 H3BM21 787 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 MYL12BO14950 172 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 PSMD8P48556 350 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ARHGAP36Q6ZRI8 547 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 IFNL1Q8IU54 200 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 PCDH19Q8TAB3 1148 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 DGCR6LQ9BY27 220 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TMEM165Q9HC07 324 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 SIX2Q9NPC8 291 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 CD84Q9UIB8 345 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TBC1D30Q9Y2I9 924 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 KRT36O76013 467 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 CDH4P55283 916 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 SLC1A5Q15758 541 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 RNF44Q7L0R7 432 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ST13P5Q8NFI4 369 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ZNF516Q92618 1163 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 MRPS26Q9BYN8 205 aaKnown RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 URADA6NGE7 173 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 OR2AG2A6NM03 316 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 TRIM38O00635 465 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 MATN3O15232 486 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 MSX2P35548 267 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 PPIGQ13427 754 aaKnown RBP eCLIP18.57■□□□□ 0.562e-7■■■□□ 14.8
UBE3C-201ENST00000348165 CBX2Q14781 532 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ARMCX4Q5H9R4 360 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ESRP1Q6NXG1 681 aaKnown RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 AP2M1Q96CW1 435 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 C6orf62Q9GZU0 229 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 RNF39Q9H2S5 420 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 NOL6Q9H6R4 1146 aaKnown RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 CYLDQ9NQC7 956 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 PHPT1Q9NRX4 125 aaPredicted RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 CLIC5Q9NZA1 410 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 COQ4Q9Y3A0 265 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 NID2Q14112 1375 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 C8AP07357 584 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 OFCC1Q8IZS5 231 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 WRAP53Q9BUR4 548 aaKnown RBP18.57■□□□□ 0.56
UBE3C-201ENST00000348165 MINDY3Q9H8M7 445 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 RPS6KA6Q9UK32 745 aa18.57■□□□□ 0.56
UBE3C-201ENST00000348165 ATXN2Q99700 1313 aaKnown RBP18.56■□□□□ 0.56
UBE3C-201ENST00000348165 C9IYK1 514 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 MFN2O95140 757 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 IDO1P14902 403 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 SLC7A2P52569 658 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 GJA9P57773 515 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 PTP4A2Q12974 167 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 CA9Q16790 459 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 ZNF618Q5T7W0 954 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 AMIGO2Q86SJ2 522 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 C17orf64Q86WR6 236 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 ZCCHC7Q8N3Z6 543 aaKnown RBP18.56■□□□□ 0.56
UBE3C-201ENST00000348165 CPA6Q8N4T0 437 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 NELL1Q92832 810 aa18.56■□□□□ 0.56
UBE3C-201ENST00000348165 CEP44Q9C0F1 390 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms