RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 NEK6Q9HC98 313 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 ROBO1Q9Y6N7 1651 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 MLNP12872 115 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 RPS9P46781 194 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 AIF1P55008 147 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 INHBEP58166 350 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 HIST2H2ACQ16777 129 aaPredicted RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 HIST2H2AA3Q6FI13 130 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 LEMD2Q8NC56 503 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 OGDHLQ9ULD0 1010 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 LRP6O75581 1613 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 CD3EAPO15446 510 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 SYNCRIPO60506 623 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 PQBP1O60828 265 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 SLC2A4P14672 509 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 TCEA1P23193 301 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 ZC3H3Q8IXZ2 948 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 FAM120BQ96EK7 910 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 RNFT2Q96EX2 444 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 ASB2Q96Q27 587 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 CNTNAP1P78357 1384 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 TREHO43280 583 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 MFSD11O43934 449 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 CPNE3O75131 537 aaKnown RBP15.47■□□□□ 0.07
SRPK1-201ENST00000346162 VPS4BO75351 444 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 PTPN9P43378 593 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 ANGPT1Q15389 498 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 TLR1Q15399 786 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 PRR23BQ6ZRT6 265 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 OR56A4Q8NGH8 313 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 OR2T34Q8NGX1 318 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 OR2T3Q8NH03 318 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 BIRC8Q96P09 236 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 SLC25A13Q9UJS0 675 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 GMPPBQ9Y5P6 360 aa15.47■□□□□ 0.07
SRPK1-201ENST00000346162 CLCN5P51795 746 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 RAB25P57735 213 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 RAB10P61026 200 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SCRN3Q0VDG4 424 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 PFKFB4Q16877 469 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 ZCCHC8Q6NZY4 707 aaKnown RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TBC1D19Q8N5T2 526 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SEMA3CQ99985 751 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 CATSPERZQ9NTU4 200 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 XPR1Q9UBH6 696 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 PDE4DIPQ5VU43 2346 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 YES1P07947 543 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TFEBP19484 476 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 ITGAXP20702 1163 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 GRK3P35626 688 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 ITGA1P56199 1179 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 MAXP61244 160 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TEX44Q53QW1 395 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 CERCAMQ5T4B2 595 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TYW3Q6IPR3 259 aaKnown RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 GAB3Q8WWW8 586 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 CEP295NLQ96MC4 621 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 NODALQ96S42 347 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 HNRNPABQ99729 332 aaKnown RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SDCBP2Q9H190 292 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 KRT84Q9NSB2 600 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 DNAJC28Q9NX36 388 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 ZNF142P52746 1687 aaPredicted RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 NFKBIEO00221 500 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 C2P06681 752 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 MAPK1P28482 360 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SOAT1P35610 550 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SP2Q02086 613 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TIGD2Q4W5G0 525 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SLC39A4Q6P5W5 647 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 FAM126BQ8IXS8 530 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 KCTD15Q96SI1 283 aaPredicted RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 TMEM106CQ9BVX2 250 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 FAM124BQ9H5Z6 455 aaPredicted RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 ZNF624Q9P2J8 865 aaPredicted RBP15.46■□□□□ 0.07
SRPK1-201ENST00000346162 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 SFMBT1Q9UHJ3 866 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 DUSP12Q9UNI6 340 aa15.46■□□□□ 0.07
SRPK1-201ENST00000346162 CCDC154A6NI56 674 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 CRHR1P34998 444 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 ASPAP45381 313 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 PYDC2Q56P42 97 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 ITIH5Q86UX2 942 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 SPPL2CQ8IUH8 684 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 TBC1D21Q8IYX1 336 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 MARVELD2Q8N4S9 558 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 ZSCAN5AQ9BUG6 496 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 PRRG3Q9BZD7 231 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 CIPCQ9C0C6 399 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 PLOD3O60568 738 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 PRIM2P49643 509 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 MAPK12P53778 367 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 STAG3L4Q8TBR4 150 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 SLC39A3Q9BRY0 314 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 DPY30Q9C005 99 aa15.45■□□□□ 0.06
SRPK1-201ENST00000346162 CCNB1IP1Q9NPC3 277 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms