RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
CDC42-202ENST00000344548 IQCF5A8MTL0 148 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 H3BMM5 538 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 H7C0S8 307 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 TGDSO95455 350 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 SERPINE1P05121 402 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 CHRNGP07510 517 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 POLD2P49005 469 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 DGKGP49619 791 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 CORO7P57737 925 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 POM121L1PQ3SYA9 428 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 ZYG11AQ6WRX3 759 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 MAVSQ7Z434 540 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 PTERQ96BW5 349 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 RPP25Q9BUL9 199 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 TRIM55Q9BYV6 548 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 IL26Q9NPH9 171 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 WASF2Q9Y6W5 498 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 CAPN8A6NHC0 703 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 ZBTB14O43829 449 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 NIPSNAP2O75323 286 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 COL6A2P12110 1019 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 BPIP17213 487 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 TECRLQ5HYJ1 363 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 CTSL3PQ5NE16 218 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 VITQ6UXI7 678 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 TRIM42Q8IWZ5 723 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 TXNDC5Q8NBS9 432 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 RAB3IL1Q8TBN0 382 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 CHFRQ96EP1 664 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 KDM4CQ9H3R0 1056 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 HACD3Q9P035 362 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 ZMYM5Q9UJ78 669 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 DNAJC16Q9Y2G8 782 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 BRWD1Q9NSI6 2320 aa13.53□□□□□ -0.24
CDC42-202ENST00000344548 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
CDC42-202ENST00000344548 A0A087X1B8 175 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.24
CDC42-202ENST00000344548 KIAA0754O94854 1291 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.24
CDC42-202ENST00000344548 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.24
CDC42-202ENST00000344548 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.24
CDC42-202ENST00000344548 MAPK8P45983 427 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 LIG3P49916 1009 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 METAP1P53582 386 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 NAGLUP54802 743 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 PTSQ03393 145 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 GRM2Q14416 872 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 LRRC66Q68CR7 880 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 ISCA2Q86U28 154 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 MTDHQ86UE4 582 aaKnown RBP13.52□□□□□ -0.24
CDC42-202ENST00000344548 GPR26Q8NDV2 337 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 AGR3Q8TD06 166 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 ERP27Q96DN0 273 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 SCRN2Q96FV2 425 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 MYADMQ96S97 322 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 CPEB1Q9BZB8 566 aaKnown RBP13.52□□□□□ -0.24
CDC42-202ENST00000344548 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 CEP44Q9C0F1 390 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 ABCG8Q9H221 673 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 CLEC1BQ9P126 229 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 PKP3Q9Y446 797 aa13.52□□□□□ -0.24
CDC42-202ENST00000344548 COL4A3Q01955 1670 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 TRIM13O60858 407 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 NDUFS3O75489 264 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 LEFTY1O75610 366 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
CDC42-202ENST00000344548 SERPINB3P29508 390 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 SUOXP51687 545 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 ARFIP2P53365 341 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 ABCE1P61221 599 aaKnown RBP13.52□□□□□ -0.25
CDC42-202ENST00000344548 RPL26P61254 145 aaKnown RBP13.52□□□□□ -0.25
CDC42-202ENST00000344548 SULT2A1Q06520 285 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 RAB30Q15771 203 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 LACTB2Q53H82 288 aaPredicted RBP13.52□□□□□ -0.25
CDC42-202ENST00000344548 ARSIQ5FYB1 569 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 VWA5B1Q5TIE3 1220 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 PAQR3Q6TCH7 311 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 TAS2R42Q7RTR8 314 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 TTC7BQ86TV6 843 aa13.52□□□□□ -0.25
CDC42-202ENST00000344548 METTL3Q86U44 580 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms