RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FEM1AQ9BSK4 669 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CENPOQ9BU64 300 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CCDC32Q9BV29 185 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 EML4Q9HC35 981 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 RAVER2Q9HCJ3 691 aaKnown RBP8.13□□□□□ -1.11
ATG4A-201ENST00000343524 NDUFAF1Q9Y375 327 aa8.13□□□□□ -1.11
ATG4A-201ENST00000343524 TYW5A2RUC4 315 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KLRG2A4D1S0 409 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 SDHDO14521 159 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TOR1BO14657 336 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TBX1O43435 398 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TULP3O75386 442 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 SNAP29O95721 258 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CLIC3O95833 236 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CHRNGP07510 517 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 GSTM1P09488 218 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 IL7P13232 177 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TNNI1P19237 187 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KLRK1P26718 216 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 IL1R2P27930 398 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 AXLP30530 894 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 UGT2B10P36537 528 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 RPS5P46782 204 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 RARRES1P49788 294 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 NDST1P52848 882 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CDH6P55285 790 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 BCAR1P56945 870 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 RPS8P62241 208 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TRAF3Q13114 568 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 IKQ13123 557 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 FADDQ13158 208 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CYP51A1Q16850 503 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TBC1D10BQ4KMP7 808 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 ESCO2Q56NI9 601 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KCNT1Q5JUK3 1230 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 C6orf141Q5SZD1 244 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 SLFN13Q68D06 897 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 PRR23BQ6ZRT6 265 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CHST15Q7LFX5 561 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 PLCZ1Q86YW0 608 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 WDR49Q8IV35 697 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 UBQLNLQ8IYU4 475 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 DCLK2Q8N568 766 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 AMER2Q8N7J2 671 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 EMID1Q96A84 441 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CERS2Q96G23 380 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 MAP6Q96JE9 813 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CDHR1Q96JP9 859 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 FAM84AQ96KN4 292 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 RNF157Q96PX1 679 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 TRAF4Q9BUZ4 470 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 SLIRPQ9GZT3 109 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KCNN2Q9H2S1 579 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KAT8Q9H7Z6 458 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 CCNB1IP1Q9NPC3 277 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 AASDHPPTQ9NRN7 309 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 OSGIN1Q9UJX0 560 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 VANGL2Q9ULK5 521 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 STAP1Q9ULZ2 295 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 USP18Q9UMW8 372 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 AP4E1Q9UPM8 1137 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
ATG4A-201ENST00000343524 KIAA0100Q14667 2235 aaKnown RBP8.12□□□□□ -1.11
ATG4A-201ENST00000343524 WDR27A2RRH5 827 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 HMX3A6NHT5 357 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 CLDN24A6NM45 220 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 UBXN8O00124 270 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 ARPC2O15144 300 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 STX7O15400 261 aaKnown RBP8.11□□□□□ -1.11
ATG4A-201ENST00000343524 DNAJB2P25686 324 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 ERP29P30040 261 aaKnown RBP8.11□□□□□ -1.11
ATG4A-201ENST00000343524 HTR2BP41595 481 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 GNPDA1P46926 289 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 ARSFP54793 590 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 GJA9P57773 515 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 STARD3Q14849 445 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 PCSK7Q16549 785 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 PLEKHG6Q3KR16 790 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 PLA2G4EQ3MJ16 856 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 BLOC1S3Q6QNY0 202 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 B3GNT9Q6UX72 402 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 DLK2Q6UY11 383 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 PAGE2Q7Z2X7 111 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 KCTD20Q7Z5Y7 419 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 GALNT7Q86SF2 657 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 NOXA1Q86UR1 476 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 BEND7Q8N7W2 519 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-201ENST00000343524 OR5H6Q8NGV6 325 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 LILRB1Q8NHL6 650 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-201ENST00000343524 NDNFQ8TB73 568 aa8.11□□□□□ -1.11
ATG4A-201ENST00000343524 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms