RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GSTM5P46439 218 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CCT3P49368 545 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 TPTEP56180 551 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 MGAT5BQ3V5L5 792 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PLET1Q6UQ28 207 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RAB43Q86YS6 212 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 EFHD2Q96C19 240 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RNFT2Q96EX2 444 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CDT1Q9H211 546 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 KIAA1551Q9HCM1 1747 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 TMCC2O75069 709 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CYP11A1P05108 521 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RPLP0P05388 317 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CHRNGP07510 517 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 IL1R2P27930 398 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RXRBP28702 533 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SEPHS1P49903 392 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF45Q02386 682 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF177Q13360 481 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PEX6Q13608 980 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 HNRNPDQ14103 355 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GLB1LQ6UWU2 654 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PCDH19Q8TAB3 1148 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 MCOLN3Q8TDD5 553 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SAMHD1Q9Y3Z3 626 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 LAMB2P55268 1798 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 C17orf102A2RUQ5 167 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 H3BRB1 525 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 H7C0S8 307 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 MFSD11O43934 449 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 C8BP07358 591 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 DBTP11182 482 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CDH1P12830 882 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CHRNA5P30532 468 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ABCG1P45844 678 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GNA12Q03113 381 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 HSDL1Q3SXM5 330 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 FAM131AQ6UXB0 335 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF621Q6ZSS3 439 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 FGD2Q7Z6J4 655 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SYT12Q8IV01 421 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GLB1L3Q8NCI6 653 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 IPCEF1Q8WWN9 437 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GATA5Q9BWX5 397 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ROGDIQ9GZN7 287 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 NXF3Q9H4D5 531 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 TUT1Q9H6E5 874 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SNX7Q9UNH6 387 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SGTAO43765 313 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 OR6B1O95007 311 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PTPN1P18031 435 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 BAG6P46379 1132 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GBE1Q04446 702 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 GNA13Q14344 377 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 MYLK3Q32MK0 819 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 FBXO43Q4G163 708 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 BORAQ6PGQ7 559 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 SAPCD2Q86UD0 394 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 LRRC17Q8N6Y2 441 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 OR52K2Q8NGK3 314 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PHF10Q8WUB8 498 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 CANT1Q8WVQ1 401 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 MTFMTQ96DP5 389 aaKnown RBP4.78□□□□□ -1.64
CSMD3-203ENST00000343508 PANX1Q96RD7 426 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF347Q96SE7 839 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 FZD10Q9ULW2 581 aa4.78□□□□□ -1.64
CSMD3-203ENST00000343508 RFPL1O75677 317 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 VNN1O95497 513 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 NFICP08651 508 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 FMO4P31512 558 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 CD86P42081 329 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF773Q6PK81 442 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 OR52B2Q96RD2 323 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 CAMKK2Q96RR4 588 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 DTLQ9NZJ0 730 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 CNTN3Q9P232 1028 aa4.78□□□□□ -1.65
CSMD3-203ENST00000343508 CROCCQ5TZA2 2017 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 YDJCA8MPS7 323 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 H0YC42 278 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZBTB24O43167 697 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HTRA2O43464 458 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZBTB14O43829 449 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HMBSP08397 361 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MBL2P11226 248 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 EPB42P16452 691 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ITIH1P19827 911 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 IMPDH1P20839 514 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 BNIP3Q12983 259 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 LCP2Q13094 533 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 RAB39AQ14964 217 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PYDC2Q56P42 97 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms