RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CDC20Q12834 499 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 LAMC2Q13753 1193 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 INAVAQ3KP66 663 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 UNC50Q53HI1 259 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 LDLRAP1Q5SW96 308 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 RBM20Q5T481 1227 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 GALNT7Q86SF2 657 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ITIH5Q86UX2 942 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 PPHLN1Q8NEY8 458 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 OR6B3Q8NGW1 331 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HPS1Q92902 700 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ASB2Q96Q27 587 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 KCTD14Q9BQ13 255 aaPredicted RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 WDR6Q9NNW5 1121 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 MTRRQ9UBK8 725 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ST14Q9Y5Y6 855 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ATP6AP2A0A1C7CYW4 349 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ASPDHA6ND91 283 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 M0QYT0 321 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HCRTO43612 131 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HBP1O60381 514 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ATP6AP2O75787 350 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 MT-CO1P00395 513 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 CDH1P12830 882 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 CHRM3P20309 590 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 PCMT1P22061 227 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HRH2P25021 359 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 NFKBIAP25963 317 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 SLC26A3P40879 764 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF135P52742 658 aaPredicted RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 HMGCS2P54868 508 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 LIPEQ05469 1076 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 TNFAIP1Q13829 316 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 DPY19L1Q2PZI1 675 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 PERM1Q5SV97 790 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 KANK2Q63ZY3 851 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF470Q6ECI4 717 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 PIWIL3Q7Z3Z3 882 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 SMG8Q8ND04 991 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 CHDHQ8NE62 594 aaPredicted RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 PJA1Q8NG27 643 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 FAM149B1Q96BN6 582 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 TSPAN17Q96FV3 270 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 AURKBQ96GD4 344 aaPredicted RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 NSMCE3Q96MG7 304 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 ING2Q9H160 280 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 SACM1LQ9NTJ5 587 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 AAR2Q9Y312 384 aaKnown RBP9.65□□□□□ -0.86
HOXA1-201ENST00000343060 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.86
HOXA1-201ENST00000343060 A0A1W2PP18 115 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 TULP3O75386 442 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 EEDO75530 441 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ARIH2O95376 493 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PAMP19021 973 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 TKTP29401 623 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ADRA1AP35348 466 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ZFP36L2P47974 494 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PLK1P53350 603 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ADIGQ0VDE8 80 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 GRIK2Q13002 908 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 TOP3AQ13472 1001 aaPredicted RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 RCAN2Q14206 197 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ZBTB6Q15916 424 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 FSCN1Q16658 493 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 LY6KQ17RY6 165 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 Q3C1V9 767 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 CELF3Q5SZQ8 465 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PROSER1Q86XN7 944 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 C8orf59Q8N0T1 100 aaPredicted RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ZFP90Q8TF47 636 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 SGCDQ92629 289 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 BIRC7Q96CA5 298 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 FCRL5Q96RD9 977 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 FEM1AQ9BSK4 669 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 CHID1Q9BWS9 393 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 BTBD2Q9BX70 525 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PLEKHA5Q9HAU0 1116 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 VTA1Q9NP79 307 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 UBP1Q9NZI7 540 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 SLC2A6Q9UGQ3 507 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF112Q9UJU3 913 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 IFT52Q9Y366 437 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PCDHGB1Q9Y5G3 927 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 DGKBQ9Y6T7 804 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 COL4A4P53420 1690 aaPredicted RBP9.64□□□□□ -0.87
HOXA1-201ENST00000343060 C19orf81C9J6K1 198 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 AURKAO14965 403 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 SLC22A1O15245 554 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 JCHAINP01591 159 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 PRR35P0CG20 571 aa9.64□□□□□ -0.87
HOXA1-201ENST00000343060 BMP4P12644 408 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms