RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 HOXD9P28356 352 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 HOXA9P31269 272 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 RAP1GDS1P52306 607 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 EPHA5P54756 1037 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 MAXP61244 160 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CRY1Q16526 586 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 RANBP10Q6VN20 620 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ZNF783Q6ZMS7 281 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 FAM217AQ8IXS0 508 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 MZB1Q8WU39 189 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SACM1LQ9NTJ5 587 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 HCFC1R1Q9NWW0 138 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CFAP97Q9P2B7 532 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 TMEM114B3SHH9 223 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 H0Y626 953 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 PFDN6O15212 129 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CLASP2O75122 1294 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 KRT37O76014 449 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CHEK2O96017 543 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 WNT3AP56704 352 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 RAB15P59190 212 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 NIPAL4Q0D2K0 466 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ZNF235Q14590 738 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 STXBP5Q5T5C0 1151 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 DENND5AQ6IQ26 1287 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CCDC117Q8IWD4 279 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 TTC16Q8NEE8 873 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ACE2Q9BYF1 805 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 POLR1EQ9GZS1 481 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 PALMDQ9NP74 551 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ADAMTS6Q9UKP5 1117 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SMG5Q9UPR3 1016 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 GFRA2O00451 464 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SCAMP3O14828 347 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 ITM2AO43736 263 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 KRT75O95678 551 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 MT-ND3P03897 115 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 HNRNPA1P09651 372 aaKnown RBP eCLIP14.68□□□□□ -0.06
PBX3-201ENST00000342287 ZNF12P17014 697 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 DDX5P17844 614 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 KRT4P19013 534 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CCR2P41597 374 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CD86P42081 329 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 NAB1Q13506 487 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 FRG1Q14331 258 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 RNF219Q5W0B1 726 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 NIPAL1Q6NVV3 410 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 KDELC1Q6UW63 502 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CES3Q6UWW8 571 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 LPCAT2Q7L5N7 544 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 UNC5BQ8IZJ1 945 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 EME1Q96AY2 570 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 CNBD2Q96M20 576 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 FCRL3Q96P31 734 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 DCUN1D5Q9BTE7 237 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ATP13A1Q9HD20 1204 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SSU72Q9NP77 194 aaKnown RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 CHRAC1Q9NRG0 131 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SLC7A8Q9UHI5 535 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 DPP7Q9UHL4 492 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 SOX13Q9UN79 622 aa14.68□□□□□ -0.06
PBX3-201ENST00000342287 ARIH1Q9Y4X5 557 aaPredicted RBP14.68□□□□□ -0.06
PBX3-201ENST00000342287 A8MU76 341 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 NRG2O14511 850 aaPredicted RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 PRPF4O43172 522 aaKnown RBP eCLIP14.67□□□□□ -0.06
PBX3-201ENST00000342287 XYLBO75191 536 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 FAM155BO75949 473 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 SNRPAP09012 282 aaKnown RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 EPCAMP16422 314 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 DDX6P26196 483 aaKnown RBP eCLIP14.67□□□□□ -0.065e-6■■■■■ 46.6
PBX3-201ENST00000342287 SLC18A1P54219 525 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 DSC2Q02487 901 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 RFTN1Q14699 578 aaPredicted RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 SHHQ15465 462 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 PCID2Q5JVF3 399 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 CXorf57Q6NSI4 855 aaKnown RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 ULK2Q8IYT8 1036 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 C4orf33Q8N1A6 199 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 CARNMT1Q8N4J0 409 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 SHKBP1Q8TBC3 707 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 ARRDC2Q8TBH0 407 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 SLC26A7Q8TE54 656 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 ZNF669Q96BR6 464 aaPredicted RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 KIFC1Q9BW19 673 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 ARNT2Q9HBZ2 717 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 DNMT3BQ9UBC3 853 aaKnown RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 UBA2Q9UBT2 640 aaPredicted RBP14.67□□□□□ -0.06
PBX3-201ENST00000342287 A0A088AWK7 358 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 CAPN8A6NHC0 703 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 MMP2P08253 660 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 SERPINB9P50453 376 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 C21orf59P57076 290 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 GPM6BQ13491 265 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 CNGA3Q16281 694 aa14.67□□□□□ -0.06
PBX3-201ENST00000342287 PCSK7Q16549 785 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms