RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
TUBD1-202ENST00000340993 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 OR4K2Q8NGD2 314 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 GRK7Q8WTQ7 553 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 APOOQ9BUR5 198 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
TUBD1-202ENST00000340993 PNMA8BQ9ULN7 279 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-202ENST00000340993 TMEM98Q9Y2Y6 226 aa13.17□□□□□ -0.3
TUBD1-202ENST00000340993 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-202ENST00000340993 DPP6P42658 865 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 CTSKP43235 329 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 POLD2P49005 469 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 LMNB2Q03252 620 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 BNIP3Q12983 259 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 ABI3BPQ7Z7G0 1075 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 TTC30BQ8N4P2 665 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
TUBD1-202ENST00000340993 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 LRRC45Q96CN5 670 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 FAM83DQ9H4H8 585 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 KLF15Q9UIH9 416 aa13.16□□□□□ -0.3
TUBD1-202ENST00000340993 LRP4O75096 1905 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-202ENST00000340993 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
TUBD1-202ENST00000340993 LRP3O75074 770 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 TMEM63AO94886 807 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 SOD1P00441 154 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 EPOP01588 193 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
TUBD1-202ENST00000340993 NUDT1P36639 197 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 RABIFP47224 123 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PFN3P60673 137 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 C1orf61Q13536 156 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 FZD2Q14332 565 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 CES3Q6UWW8 571 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 TMC3Q7Z5M5 1100 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 JAMLQ86YT9 394 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 HID1Q8IV36 788 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PNPLA1Q8N8W4 532 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 DENND6BQ8NEG7 585 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PDXPQ96GD0 296 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 DNAJC1Q96KC8 554 aaKnown RBP13.15□□□□□ -0.3
TUBD1-202ENST00000340993 FKBPLQ9UIM3 349 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PKP3Q9Y446 797 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PRKAB1Q9Y478 270 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
TUBD1-202ENST00000340993 PSMD11O00231 422 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.31
TUBD1-202ENST00000340993 FFAR2O15552 330 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A9O60656 530 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 ASMTLO95671 621 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CELA2BP08218 269 aaPredicted RBP13.15□□□□□ -0.31
TUBD1-202ENST00000340993 PRSS56P0CW18 603 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A6P19224 532 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A1P22309 533 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A4P22310 534 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 MGAT1P26572 445 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CA5AP35218 305 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A3P35503 534 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A5P35504 534 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 PTGIRP43119 386 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 ESRP1Q6NXG1 681 aaKnown RBP13.15□□□□□ -0.31
TUBD1-202ENST00000340993 GDAP1Q8TB36 358 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CPT1BQ92523 772 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CAMK1GQ96NX5 476 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 PPP1R2P1Q96PQ5 205 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 TRIM56Q9BRZ2 755 aaKnown RBP13.15□□□□□ -0.31
TUBD1-202ENST00000340993 DPH5Q9H2P9 285 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A7Q9HAW7 530 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A10Q9HAW8 530 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UGT1A8Q9HAW9 530 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 UCKL1Q9NWZ5 548 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 SLC2A6Q9UGQ3 507 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 CDC23Q9UJX2 597 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.31
TUBD1-202ENST00000340993 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.31
TUBD1-202ENST00000340993 ARID1BQ8NFD5 2236 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 OR51F1A6NGY5 319 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 C2orf81A6NN90 581 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 PSMD3O43242 534 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 BANF1O75531 89 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 RASGRP1O95267 797 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CER1O95813 267 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CDK3Q00526 305 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CDH17Q12864 832 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 EIF2B5Q13144 721 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms