RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ALG14Q96F25 216 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ELMO2Q96JJ3 720 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 WDR77Q9BQA1 342 aaPredicted RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 OLA1Q9NTK5 396 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 IL36AQ9UHA7 158 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 OR1A2Q9Y585 309 aa11.13□□□□□ -0.63
ATXN3-201ENST00000340660 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
ATXN3-201ENST00000340660 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 K7ERQ8 282 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 MT-CO1P00395 513 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 IGHDP01880 384 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 SRCP12931 536 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 HTR1BP28222 390 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 SLC12A1Q13621 1099 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 FAM180AQ6UWF9 173 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 GFRALQ6UXV0 394 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 RASGRP3Q8IV61 690 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 UBR7Q8N806 425 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 TAF4BQ92750 862 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 FUBP1Q96AE4 644 aaKnown RBP11.12□□□□□ -0.63
ATXN3-201ENST00000340660 WDR92Q96MX6 357 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 ZHX3Q9H4I2 956 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 FGF22Q9HCT0 170 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 TRPS1Q9UHF7 1281 aa11.12□□□□□ -0.63
ATXN3-201ENST00000340660 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 SLC26A4O43511 780 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CREB3O43889 395 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 EIF5BO60841 1220 aaKnown RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CDC45O75419 566 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 SPAG6O75602 509 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 TIAF1O95411 115 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 ALPPP05187 535 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 GARTP22102 1010 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 L1CAMP32004 1257 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 RPS15P62841 145 aaKnown RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CDC16Q13042 620 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 IL17AQ16552 155 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 HYIQ5T013 277 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 PODNL1Q6PEZ8 512 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 WDR74Q6RFH5 385 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 TMEM207Q6UWW9 146 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 NCCRP1Q6ZVX7 275 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 GPBP1Q86WP2 473 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CIR1Q86X95 450 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 OR52K2Q8NGK3 314 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 CYFIP2Q96F07 1278 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 DDX50Q9BQ39 737 aaKnown RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 APOOQ9BUR5 198 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 PLA2G12AQ9BZM1 189 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 KLHL3Q9UH77 587 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 VPS51Q9UID3 782 aa11.11□□□□□ -0.63
ATXN3-201ENST00000340660 FARSAQ9Y285 508 aaKnown RBP11.11□□□□□ -0.63
ATXN3-201ENST00000340660 TMEM202A6NGA9 273 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 NEMP1O14524 444 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 ICMTO60725 284 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 MT-ND3P03897 115 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 VAV2P52735 878 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 RRADP55042 308 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 BIRC2Q13490 618 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 ATP1A4Q13733 1029 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 MYBPC3Q14896 1274 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 RAB41Q5JT25 222 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 FCRL6Q6DN72 434 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 UNC45BQ8IWX7 931 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 ZBTB2Q8N680 514 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 BCORP1Q8N888 145 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 RNF139Q8WU17 664 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 TM9SF4Q92544 642 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 AHCYL2Q96HN2 611 aaKnown RBP11.1□□□□□ -0.63
ATXN3-201ENST00000340660 CCDC114Q96M63 670 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 TWNKQ96RR1 684 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 TRIM56Q9BRZ2 755 aaKnown RBP11.1□□□□□ -0.63
ATXN3-201ENST00000340660 STRA6Q9BX79 667 aa11.1□□□□□ -0.63
ATXN3-201ENST00000340660 XPO7Q9UIA9 1087 aaKnown RBP11.1□□□□□ -0.63
ATXN3-201ENST00000340660 CHD5Q8TDI0 1954 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 SERINC4A6NH21 518 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 SMAD6O43541 496 aaKnown RBP11.09□□□□□ -0.63
ATXN3-201ENST00000340660 SLCO2B1O94956 709 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 REC8O95072 547 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 ZWINTO95229 277 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 IDEP14735 1019 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 RBMXP38159 391 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms