RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 RENBPP51606 427 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 KCNK10P57789 538 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 ADRM1Q16186 407 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 RAB41Q5JT25 222 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 LDLRAP1Q5SW96 308 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 TIGD7Q6NT04 549 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CYHR1Q6ZMK1 362 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 ERMP1Q7Z2K6 904 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CNTN4Q8IWV2 1026 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 RTP3Q9BQQ7 232 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 BPIFA1Q9NP55 256 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.37□□□□□ -0.116e-8■■□□□ 13.9
CPSF7-201ENST00000340437 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 SNAP29O95721 258 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 GPX3P22352 226 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CD52P31358 61 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CCR3P51677 355 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ATP1A4Q13733 1029 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TSNQ15631 228 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 DNAJC14Q6Y2X3 702 aaPredicted RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 AGMOQ6ZNB7 445 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TMEM86AQ8N2M4 240 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 EFHBQ8N7U6 833 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 BRI3BPQ8WY22 251 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PPM1MQ96MI6 270 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ING2Q9H160 280 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 FLRT1Q9NZU1 646 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 SLC8A2Q9UPR5 921 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 A0A087WXM4 84 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CD3EAPO15446 510 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 NFKBIAP25963 317 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 GGT5P36269 586 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ACVRL1P37023 503 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 UFM1P61960 85 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 IL1RL1Q01638 556 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TRAF2Q12933 501 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 BNIP3Q12983 259 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 IHHQ14623 411 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PTPRRQ15256 657 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PAQR3Q6TCH7 311 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 FBXO39Q8N4B4 442 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 RTL3Q8N8U3 475 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TSGA13Q96PP4 275 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 MTG1Q9BT17 334 aaPredicted RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CDC7O00311 574 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 LBPP18428 481 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 LIPEQ05469 1076 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ZNF235Q14590 738 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 NHSL2Q5HYW2 709 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 TMEM126BQ8IUX1 230 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 ERI1Q8IV48 349 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 DHRSXQ8N5I4 330 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 CDYL2Q8N8U2 506 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 LRRC58Q96CX6 371 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 SLC25A51Q9H1U9 297 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 GID8Q9NWU2 228 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 OSER1Q9NX31 292 aa14.36□□□□□ -0.11
CPSF7-201ENST00000340437 WARS2Q9UGM6 360 aaKnown RBP14.36□□□□□ -0.11
CPSF7-201ENST00000340437 J3QRK9 145 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 BTN3A1O00481 513 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 LEPRP48357 1165 aaKnown RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 PIK3CGP48736 1102 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 HUNKP57058 714 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 NAA20P61599 178 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 HERVK_113P63132 956 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TRAP1Q12931 704 aaKnown RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 SEMA3AQ14563 771 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TAF1CQ15572 869 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 C16orf87Q6PH81 154 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 EPHX4Q8IUS5 362 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 CLEC4FQ8N1N0 589 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 THEM5Q8N1Q8 247 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 FBXL8Q96CD0 374 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 ERVK-6Q9BXR3 956 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TRIM15Q9C019 465 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 BOLA2-SMG1P6H3BVE0 249 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 DNAJB2P25686 324 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 THPOP40225 353 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 AAK1Q2M2I8 961 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 PAGE3Q5JUK9 113 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 GIPC3Q8TF64 312 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TFAP2CQ92754 450 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 PGAP3Q96FM1 320 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 TIMMDC1Q9NPL8 285 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 POLG2Q9UHN1 485 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 MBLAC1A4D2B0 266 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 NPEPPSL1A6NEC2 478 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 BNIP3LO60238 219 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 ATE1O95260 518 aa14.35□□□□□ -0.11
CPSF7-201ENST00000340437 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-201ENST00000340437 ITGB6P18564 788 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms