RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ECT2LQ008S8 904 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 RNF43Q68DV7 783 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 ARSKQ6UWY0 536 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 STK40Q8N2I9 435 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 PQLC1Q8N2U9 271 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 UBR7Q8N806 425 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 SPATA9Q9BWV2 254 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 B8ZZF3 427 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 H3BNX3 289 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 CD86P42081 329 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 SMARCD3Q6STE5 483 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 SQORQ9Y6N5 450 aa12.82□□□□□ -0.36
USP47-202ENST00000339865 RP1L1Q8IWN7 2480 aaPredicted RBP12.82□□□□□ -0.36
USP47-202ENST00000339865 DPPA5A6NC42 116 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 EFCAB9A8MZ26 197 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SLC26A4O43511 780 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FESP07332 822 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 YES1P07947 543 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FNTBP49356 437 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 THOP1P52888 689 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 LIPEQ05469 1076 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 UBE2E3Q969T4 207 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 MSANTD3Q96H12 275 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 XPNPEP3Q9NQH7 507 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FBXL3Q9UKT7 428 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SORCS3Q9UPU3 1222 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 YARS2Q9Y2Z4 477 aaKnown RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 PCDHGB3Q9Y5G1 929 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ACTL7BQ9Y614 415 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 LAMC1P11047 1609 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 OTOL1A6NHN0 477 aaPredicted RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 HBP1O60381 514 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 OAZ2O95190 189 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PGLSO95336 258 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 URODP06132 367 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 CHRM5P08912 532 aaPredicted RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 CPT1AP50416 773 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 DPYSQ14117 519 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 RBM20Q5T481 1227 aaKnown RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 OR52J3Q8NH60 311 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 MROH8Q9H579 483 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PCDHB11Q9Y5F2 797 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 E2F3O00716 465 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 CD2P06729 351 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 THP07101 528 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SERPINA6P08185 405 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FDX1P10109 184 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ZNF12P17014 697 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 NRG1Q02297 640 aaPredicted RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 CRTC1Q6UUV9 634 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ZNF627Q7L945 461 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 TCEAL3Q969E4 200 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 CDK5RAP1Q96SZ6 601 aaKnown RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 ALADP13716 330 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PCID2Q5JVF3 399 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 POTEHQ6S545 545 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 VTCN1Q7Z7D3 282 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 TMEM17Q86X19 198 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 MCEMP1Q8IX19 187 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SDR16C5Q8N3Y7 309 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 VAT1Q99536 393 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 AIPO00170 330 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PLATP00750 562 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 RAB4AP20338 218 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 AMPD1P23109 780 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 RPA4Q13156 261 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 SIRT2Q8IXJ6 389 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 OXR1Q8N573 874 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 C1orf216Q8TAB5 229 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 BPIFB1Q8TDL5 484 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 CCDC107Q8WV48 283 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 TNFRSF25Q93038 417 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 NXPE2Q96DL1 559 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ZDHHC9Q9Y397 364 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FUT4P22083 530 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 S100PP25815 95 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 FAM92BQ6ZTR7 304 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 CHERPQ8IWX8 916 aaKnown RBP12.81□□□□□ -0.36
USP47-202ENST00000339865 GSTCDQ8NEC7 633 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 NEDD1Q8NHV4 660 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 PPP3R2Q96LZ3 170 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 ALG2Q9H553 416 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 TAS2R3Q9NYW6 316 aa12.81□□□□□ -0.36
USP47-202ENST00000339865 A2MP01023 1474 aa12.8□□□□□ -0.36
USP47-202ENST00000339865 TPST2O60704 377 aa12.8□□□□□ -0.36
USP47-202ENST00000339865 AVILO75366 819 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms