RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CYP3A4P08684 503 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF286BP0CG31 522 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CDC42P60953 191 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 POLR2FP61218 127 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PLGLB1Q02325 96 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ELP6Q0PNE2 266 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TBX2Q13207 712 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SHROOM1Q2M3G4 852 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ANKRD40Q6AI12 368 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 FAAH2Q6GMR7 532 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SLC24A5Q71RS6 500 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SPARTQ8N0X7 666 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ABRAQ8N0Z2 381 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM174Q8WUU8 243 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 AKT1S1Q96B36 256 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CXorf40BQ96DE9 158 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NSMCE2Q96MF7 247 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NSMCE3Q96MG7 304 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 KAT8Q9H7Z6 458 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 AHCTF1Q8WYP5 2266 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CREBBPQ92793 2442 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MYL12BO14950 172 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NBNO60934 754 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CFHP08603 1231 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CYP21A2P08686 494 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINF2P08697 491 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GSTM1P09488 218 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 HSD17B2P37059 387 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ELK3P41970 407 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GSTM4Q03013 218 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF33BQ06732 778 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NME3Q13232 169 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CAMK2GQ13555 558 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM132CQ8N3T6 1108 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CARNMT1Q8N4J0 409 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 DEDD2Q8WXF8 326 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PLEKHG4BQ96PX9 1271 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PIGSQ96S52 555 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF607Q96SK3 696 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 DUSP23Q9BVJ7 150 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 C6orf62Q9GZU0 229 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 IL22Q9GZX6 179 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PCBD2Q9H0N5 130 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ADGRE2Q9UHX3 823 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA13Q9Y5I0 950 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 A0A0G2JMP0 313 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ANKDD1BA6NHY2 528 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF701M0R085 212 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MEN1O00255 615 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 AKAP10O43572 662 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GFRA3O60609 400 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ICAM1P05362 532 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RPL10P27635 214 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TLX1P31314 330 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SCNN1AP37088 669 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 SLC1A6P48664 564 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CD47Q08722 323 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MGAT5Q09328 741 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PCID2Q5JVF3 399 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PAPD7Q5XG87 772 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GDF6Q6KF10 455 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF746Q6NUN9 644 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 LAYNQ6UX15 382 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RBMS3Q6XE24 437 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 FAM129CQ86XR2 697 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RFX6Q8HWS3 928 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PPM1NQ8N819 430 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ANKRD42Q8N9B4 389 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 OR4M2Q8NGB6 313 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ALG2Q9H553 416 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NGBQ9NPG2 151 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 UBFD1O14562 309 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TGOLN2O43493 480 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 WBP4O75554 376 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CNTN5O94779 1100 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NOL4O94818 638 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PLGP00747 810 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 LTFP02788 710 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GNAZP19086 355 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ME2P23368 584 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CEBPGP53567 150 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 GCNT1Q02742 428 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF33AQ06730 810 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MAPK7Q13164 816 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 PRKG2Q13237 762 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RASA2Q15283 850 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 KRT31Q15323 416 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 TBRG1Q3YBR2 411 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 DENND1BQ6P3S1 775 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RAVER1Q8IY67 606 aaKnown RBP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CCNYL1Q8N7R7 359 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RHBDD1Q8TEB9 315 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 HMGB4Q8WW32 186 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 MYO19Q96H55 970 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 CNDP1Q96KN2 507 aa3.28□□□□□ -1.88
CSMD3-202ENST00000339701 RBM15Q96T37 977 aaKnown RBP eCLIP3.28□□□□□ -1.88
CSMD3-202ENST00000339701 AIFM2Q9BRQ8 373 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms