RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 LRRC14BA6NHZ5 514 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
LITAF-201ENST00000339430 CSPG5O95196 566 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 GLP2RO95838 553 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 MYOGP15173 224 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 IMPDH1P20839 514 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PSME3P61289 254 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 ZNF678Q5SXM1 525 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 THEMIS2Q5TEJ8 643 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 CHSY3Q70JA7 882 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 SLC22A9Q8IVM8 553 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 LILRA2Q8N149 483 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PCDHAC1Q9H158 963 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PCDHGA7Q9Y5G6 932 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 E7ENX8 843 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PSMD12O00232 456 aaPredicted RBP16.29■□□□□ 0.2
LITAF-201ENST00000339430 PPP6CO00743 305 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 TEX28O15482 410 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 SIX3O95343 332 aaPredicted RBP16.29■□□□□ 0.2
LITAF-201ENST00000339430 CTNNB1P35222 781 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 XIAPP98170 497 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 RALGDSQ12967 914 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PDK3Q15120 406 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
LITAF-201ENST00000339430 FAM45BPQ6NSW5 357 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 SPRED2Q7Z698 418 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 FAM45AQ8TCE6 357 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 FATE1Q969F0 183 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 TADA1Q96BN2 335 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 FAR2Q96K12 515 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PKP2Q99959 881 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 PTGDR2Q9Y5Y4 395 aa16.29■□□□□ 0.2
LITAF-201ENST00000339430 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 FBP2O00757 339 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 CTSAP10619 480 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 BMPR1AP36894 532 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 RAB33AQ14088 237 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 SQLEQ14534 574 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 RFTN1Q14699 578 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 PARP15Q460N3 678 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 UNC50Q53HI1 259 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 TPGS2Q68CL5 300 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 PAOXQ6QHF9 649 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 LGI2Q8N0V4 545 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 EXOC2Q96KP1 924 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 C3orf30Q96M34 536 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 IL37Q9NZH6 218 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 RIMS3Q9UJD0 308 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 AK5Q9Y6K8 562 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 ANKRD12Q6UB98 2062 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 PLXNA4Q9HCM2 1894 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 UBXN8O00124 270 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 ACOT8O14734 319 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 PEX1O43933 1283 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 TLR5O60602 858 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 LILRB3O75022 631 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 BCAS2O75934 225 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 SNUPNO95149 360 aaKnown RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 RTN3O95197 1032 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 CD1DP15813 335 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 NME5P56597 212 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 TIAL1Q01085 375 aaKnown RBP eCLIP16.28■□□□□ 0.25e-7■□□□□ 11.1
LITAF-201ENST00000339430 GEN1Q17RS7 908 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 CYHR1Q6ZMK1 362 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
LITAF-201ENST00000339430 OR7D4Q8NG98 312 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 C17orf80Q9BSJ5 609 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 GIMAP2Q9UG22 337 aa16.28■□□□□ 0.2
LITAF-201ENST00000339430 SLC38A8A6NNN8 435 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 TRIM38O00635 465 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 PRAMEF11O60813 436 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 TACR2P21452 398 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 POLE2P56282 527 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 TLR1Q15399 786 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 OR4D1Q15615 310 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 FBXO48Q5FWF7 155 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
LITAF-201ENST00000339430 PTGR2Q8N8N7 351 aaPredicted RBP16.27■□□□□ 0.2
LITAF-201ENST00000339430 SMIM14Q96QK8 99 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
LITAF-201ENST00000339430 POLR3BQ9NW08 1133 aaPredicted RBP16.27■□□□□ 0.2
LITAF-201ENST00000339430 BCAP29Q9UHQ4 241 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 PCDHGB5Q9Y5G0 923 aa16.27■□□□□ 0.2
LITAF-201ENST00000339430 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.19
LITAF-201ENST00000339430 FAM92AA1XBS5 289 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 ARHGEF15O94989 841 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 CXCL14O95715 111 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 IGLV3-27P01718 113 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms