RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ARHGAP17Q68EM7 881 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CRTC3Q6UUV7 619 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TMC5Q6UXY8 1006 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SH2D3CQ8N5H7 860 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ZNF527Q8NB42 609 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PELOQ9BRX2 385 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 MYLK2Q9H1R3 596 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 LRMDAQ9H2I8 198 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DNAJC28Q9NX36 388 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DCTN4Q9UJW0 460 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 NUDT5Q9UKK9 219 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CPED1A4D0V7 1026 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CCDC154A6NI56 674 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 FGFR3P22607 806 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 EPS8Q12929 822 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TCEAL6Q6IPX3 200 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TAPT1Q6NXT6 567 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TMEM26Q6ZUK4 368 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 HORMAD2Q8N7B1 307 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SIDT2Q8NBJ9 832 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ACMSDQ8TDX5 336 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 MS4A4AQ96JQ5 239 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TOX2Q96NM4 488 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SLC38A2Q96QD8 506 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TCF12Q99081 682 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 MRPL45Q9BRJ2 306 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 FTSJ1Q9UET6 329 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DUX1O43812 170 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 COQ9O75208 318 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 HGFP14210 728 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 VIPR1P32241 457 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 MC4RP32245 332 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SSR2P43308 183 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TSNQ15631 228 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ADRM1Q16186 407 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CST9Q5W186 159 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DUPD1Q68J44 220 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 WDR59Q6PJI9 974 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CNSTQ6PJW8 725 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 FIP1L1Q6UN15 594 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SLC29A4Q7RTT9 530 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 RAD51AP1Q96B01 352 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 Q96MT0 163 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PLEKHG4BQ96PX9 1271 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DPYSL5Q9BPU6 564 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PNMA8BQ9ULN7 279 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PCDHGA2Q9Y5H1 932 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CACNA1SQ13698 1873 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PLGP00747 810 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ACADLP28330 430 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 L1CAMP32004 1257 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TIE1P35590 1138 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 HSPA14Q0VDF9 509 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ZNF155Q12901 538 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 LARS2Q15031 903 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 GPR33Q49SQ1 333 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 KIAA1161Q6NSJ0 714 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 FGD2Q7Z6J4 655 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DNAJB7Q7Z6W7 309 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 DAW1Q8N136 415 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SVOPQ8N4V2 548 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 C12orf29Q8N999 325 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 RNASE11Q8TAA1 199 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 KLHL5Q96PQ7 755 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 MCOLN1Q9GZU1 580 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ETNK2Q9NVF9 386 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ADAMTS5Q9UNA0 930 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SNX7Q9UNH6 387 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SOBPA7XYQ1 873 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 RECQL5O94762 991 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SOX30O94993 753 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CCDC159P0C7I6 412 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 GIMD1P0DJR0 217 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 EDNRBP24530 442 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 HCAR3P49019 387 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 NUMBP49757 651 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ST13P50502 369 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CLCNKBP51801 687 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 PMF1Q6P1K2 205 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ADCK1Q86TW2 530 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SLC44A2Q8IWA5 706 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CCDC33Q8N5R6 958 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ARL14EPQ8N8R7 260 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 C1orf127Q8N9H9 656 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 FNDC5Q8NAU1 212 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CEP76Q8TAP6 659 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TEFMQ96QE5 360 aaKnown RBP7.33□□□□□ -1.24
EPHA3-201ENST00000336596 SGIP1Q9BQI5 828 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TM6SF2Q9BZW4 377 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 TMEM27Q9HBJ8 222 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 CROTQ9UKG9 612 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 EFR3BQ9Y2G0 817 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
EPHA3-201ENST00000336596 ILVBLA1L0T0 632 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 KCNU1A8MYU2 1149 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 CLDN5O00501 218 aa7.32□□□□□ -1.24
EPHA3-201ENST00000336596 WNT9AO14904 365 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms