RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 DSELQ8IZU8 1212 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF615Q8N8J6 731 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 UROC1Q96N76 676 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 FRMD6Q96NE9 622 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 AIF1LQ9BQI0 150 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 PCDH10Q9P2E7 1040 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ANXA2P2A6NMY6 339 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 EFCAB9A8MZ26 197 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ITGB3P05106 788 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ANXA2P07355 339 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RHOCP08134 193 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 LCN1P31025 176 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MATKP42679 507 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 BST1Q10588 318 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZYG11AQ6WRX3 759 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TLCD1Q96CP7 247 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MTIF3Q9H2K0 278 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CCDC86Q9H6F5 360 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF69Q9UC07 566 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 NUFIP1Q9UHK0 495 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OR7A10O76100 309 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 HPRP00739 348 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 HLA-DQA2P01906 255 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 IFNW1P05000 195 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 NR2C1P13056 603 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CTPS1P17812 591 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 GLRA2P23416 452 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MBTD1Q05BQ5 628 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM132BQ14DG7 1078 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ADGRD1Q6QNK2 874 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ADAMTS10Q9H324 1103 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DPAGT1Q9H3H5 408 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ARL15Q9NXU5 204 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 GRHL1Q9NZI5 618 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 PDP1Q9P0J1 537 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 FABP12A6NFH5 140 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SIGLEC16A6NMB1 481 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SLC28A2O43868 658 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RAMP2O60895 175 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 FGF1P05230 155 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CDH1P12830 882 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 LIMK2P53671 638 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SMU1Q2TAY7 513 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 PANX1Q96RD7 426 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 LRRC42Q9Y546 428 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 A0A0J9YYE9 177 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CD44P16070 742 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 KDELR1P24390 212 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DOK7Q18PE1 504 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OR5K1Q8NHB7 308 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 EXOC2Q96KP1 924 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF471Q9BX82 626 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TOR4AQ9NXH8 423 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ERVK-11Q9UQG0 969 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DUSP10Q9Y6W6 482 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CACNA1FO60840 1977 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ANKDD1BA6NHY2 528 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 H3BNH8 94 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 NRP2O60462 931 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 NPHS1O60500 1241 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 AP2A2O94973 939 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MGAT1P26572 445 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 AQP4P55087 323 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TAS2R41P59536 307 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DEFA5Q01523 94 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 NDUFA9Q16795 377 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ASTE1Q2TB18 679 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 IQCCQ4KMZ1 466 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 PTAR1Q7Z6K3 402 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ENDOVQ8N8Q3 282 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZSWIM2Q8NEG5 633 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OR4A15Q8NGL6 344 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TBC1D16Q8TBP0 767 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 PSKH2Q96QS6 385 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SEMA6BQ9H3T3 888 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OSGEPQ9NPF4 335 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 EVA1BQ9NVM1 165 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 VPS28Q9UK41 221 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DOLKQ9UPQ8 538 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MEGF6O75095 1541 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TSTD3H0UI37 97 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RAB5CP51148 216 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MAMLD1Q13495 774 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 STARD3Q14849 445 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 GCNT7Q6ZNI0 430 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DNERQ8NFT8 737 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OR52E6Q96RD3 313 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 YIPF2Q9BWQ6 316 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ATRNO75882 1429 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RFXANKO14593 260 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ACOX3O15254 700 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SLC25A12O75746 678 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RGS7P49802 495 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 DDX39BQ13838 428 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF697Q5TEC3 545 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 UNC93AQ86WB7 457 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF567Q8N184 647 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms