RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PTPRRQ15256 657 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 TPSAB1Q15661 275 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 CDKN3Q16667 212 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 ZNF423Q2M1K9 1284 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 UAP1L1Q3KQV9 507 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 RAET1GQ6H3X3 334 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 PARGQ86W56 976 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 CBARPQ8N350 705 aaPredicted RBP20.46■□□□□ 0.87
MRPL40-201ENST00000333130 MNS1Q8NEH6 495 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 SMIM14Q96QK8 99 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 L2HGDHQ9H9P8 463 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 PHPT1Q9NRX4 125 aaPredicted RBP20.46■□□□□ 0.87
MRPL40-201ENST00000333130 RXFP3Q9NSD7 469 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 ASCC3Q8N3C0 2202 aaKnown RBP20.46■□□□□ 0.87
MRPL40-201ENST00000333130 H3BM21 787 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 USP12O75317 370 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 IVDP26440 423 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 SPINT3P49223 89 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 DPTQ07507 201 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 SLC14A1Q13336 389 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 MSLNQ13421 630 aaPredicted RBP20.46■□□□□ 0.87
MRPL40-201ENST00000333130 SPARCL1Q14515 664 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 INAVAQ3KP66 663 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 ZDHHC20Q5W0Z9 365 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 PNCKQ6P2M8 343 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 MACC1Q6ZN28 852 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 MAATS1Q7Z4T9 603 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 TECPR1Q7Z6L1 1165 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 APOL2Q9BQE5 337 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 APOOQ9BUR5 198 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 PKP3Q9Y446 797 aa20.46■□□□□ 0.87
MRPL40-201ENST00000333130 CFAP54Q96N23 3096 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 SPTY2D1-AS1A0A0U1RR47 76 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 FAM187AA6NFU0 413 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 C2orf81A6NN90 581 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CDX4O14627 284 aaPredicted RBP20.45■□□□□ 0.86
MRPL40-201ENST00000333130 RAD51CO43502 376 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 PPFIA2O75334 1257 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CRTAMO95727 393 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 GM2AP17900 193 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 TEAD1P28347 426 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 GPR1P46091 355 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CDK16Q00536 496 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 PPP1R21Q6ZMI0 780 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 NLRP8Q86W28 1048 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 SPATS2Q86XZ4 545 aaKnown RBP20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CEP112Q8N8E3 955 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 DNAAF3Q8N9W5 541 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CPT1BQ92523 772 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 TRIM51Q9BSJ1 452 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 ABCG8Q9H221 673 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 FAM83DQ9H4H8 585 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 GPR27Q9NS67 375 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 TM7SF3Q9NS93 570 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.45■□□□□ 0.86
MRPL40-201ENST00000333130 ASIC3Q9UHC3 531 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 CD84Q9UIB8 345 aa20.45■□□□□ 0.86
MRPL40-201ENST00000333130 A0A0U1RQS6 177 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 CTAGE15A4D2H0 777 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 CTAGE8P0CG41 777 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 HMGCLP35914 325 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 KIAA1024LP59773 190 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 DCDC1P59894 354 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 NFATC4Q14934 902 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 TMC3Q7Z5M5 1100 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 CTAGE6Q86UF2 777 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 CTAGE4Q8IX94 777 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 SLC22A18ASQ8N1D0 253 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 MMGT1Q8N4V1 131 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 OR2I1PQ8NGU4 316 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 DNAJC28Q9NX36 388 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 FNDC3AQ9Y2H6 1198 aaKnown RBP20.44■□□□□ 0.86
MRPL40-201ENST00000333130 OR1A2Q9Y585 309 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 PCDHGB2Q9Y5G2 931 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 SPO11Q9Y5K1 396 aa20.44■□□□□ 0.86
MRPL40-201ENST00000333130 A0A1B0GTQ1 180 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 TCRBV7S3A2A0A539 114 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 AP3B1O00203 1094 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 HOXC4P09017 264 aaPredicted RBP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 MYCLP1P12525 358 aaPredicted RBP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 TRIM23P36406 574 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 ADCY8P40145 1251 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 BLKP51451 505 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 HNRNPKP61978 463 aaKnown RBP eCLIP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 CDH17Q12864 832 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 TAF1AQ15573 450 aaPredicted RBP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 RNASEH2BQ5TBB1 312 aaKnown RBP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 ZNF534Q76KX8 674 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 HEATR4Q86WZ0 1026 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 PLA2G15Q8NCC3 412 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 BRSK1Q8TDC3 778 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 BTN2A2Q8WVV5 523 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 WDR92Q96MX6 357 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 PLEKHG4BQ96PX9 1271 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 ZSCAN5AQ9BUG6 496 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 CASS4Q9NQ75 786 aa20.43■□□□□ 0.86
MRPL40-201ENST00000333130 NFKBIL1Q9UBC1 381 aaPredicted RBP20.43■□□□□ 0.86
MRPL40-201ENST00000333130 DNALI1O14645 258 aaPredicted RBP20.42■□□□□ 0.86
MRPL40-201ENST00000333130 SLC30A4O14863 429 aa20.42■□□□□ 0.86
MRPL40-201ENST00000333130 STX7O15400 261 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms