RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ESR1P03372 595 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 C6P13671 934 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SPRP35270 261 aaPredicted RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HSD17B2P37059 387 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SLC26A3P40879 764 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 NSG1P42857 185 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 KCNJ1P48048 391 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ARRB1P49407 418 aaPredicted RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 RGS4P49798 205 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SIM2Q14190 667 aaPredicted RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 NFATC4Q14934 902 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 PCSK7Q16549 785 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 BBS9Q3SYG4 887 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 BCL7AQ4VC05 210 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 GRTP1Q5TC63 336 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 DENND2CQ68D51 928 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 NEK10Q6ZWH5 1172 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 GKN2Q86XP6 184 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 DDHD1Q8NEL9 900 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 BLOC1S5Q8TDH9 187 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TOE1Q96GM8 510 aaKnown RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HIC2Q96JB3 615 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HHIPQ96QV1 700 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 DUSP23Q9BVJ7 150 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 RAB11FIP5Q9BXF6 653 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 GSDMCQ9BYG8 508 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF180Q9UJW8 692 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SLC6A14Q9UN76 642 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CEP290O15078 2479 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 C17orf113A0A1B0GUU1 675 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 NEMP2A6NFY4 417 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SHISA7A6NL88 538 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 C10orf142B7Z368 130 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 K7ERQ8 282 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 KMOO15229 486 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 METTL18O95568 372 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TNFP01375 233 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HNF1BP35680 557 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 MAGEA4P43358 317 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 RPL21P46778 160 aaKnown RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 LIG3P49916 1009 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 AFF3P51826 1226 aaKnown RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SLC12A2P55011 1212 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 MAXP61244 160 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HNRNPKP61978 463 aaKnown RBP eCLIP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ARHGAP8P85298 464 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ASPHQ12797 758 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CNGA3Q16281 694 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ALS2CLQ60I27 953 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 AADACL2Q6P093 401 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CRTC1Q6UUV9 634 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TMEM92Q6UXU6 159 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 MARK2Q7KZI7 788 aaKnown RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TECPR1Q7Z6L1 1165 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ABI3BPQ7Z7G0 1075 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TMEM135Q86UB9 458 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CNTN4Q8IWV2 1026 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 C17orf53Q8N3J3 647 aaPredicted RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 OTUD6BQ8N6M0 293 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 MYRIPQ8NFW9 859 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SORCS1Q8WY21 1168 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 EZH1Q92800 747 aaPredicted RBP5.15□□□□□ -1.58
LRIT3-201ENST00000327908 COPS8Q99627 209 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 HERPUD2Q9BSE4 406 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CLPBQ9H078 707 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 CYP8B1Q9UNU6 501 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 SNX24Q9Y343 169 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 PCDHGC4Q9Y5F7 938 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 MAD1L1Q9Y6D9 718 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 IQANK1A0A1B0GTG1 560 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 H3BQF6 201 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 TMX2-CTNND1H3BSU7 103 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 LIN7AO14910 233 aaPredicted RBP5.15□□□□□ -1.59
LRIT3-201ENST00000327908 KRT37O76014 449 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 PIGNO95427 931 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 COL9A1P20849 921 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 CD38P28907 300 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 DRD3P35462 400 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 NBL1P41271 181 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 ABL2P42684 1182 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 WASP42768 502 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 ADCY2Q08462 1091 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 RALGDSQ12967 914 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 PDIA2Q13087 525 aaKnown RBP5.15□□□□□ -1.59
LRIT3-201ENST00000327908 SLC14A1Q13336 389 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 ANKRD20A4Q4UJ75 823 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 LRRC66Q68CR7 880 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 FAM45BPQ6NSW5 357 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 SLC25A41Q8N5S1 370 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 MDGA1Q8NFP4 955 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 OR4L1Q8NH43 312 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 FAM45AQ8TCE6 357 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 ZNF398Q8TD17 642 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 ACMSDQ8TDX5 336 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 MAGEB10Q96LZ2 347 aaPredicted RBP5.15□□□□□ -1.59
LRIT3-201ENST00000327908 FOPNLQ96NB1 174 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 TMEM109Q9BVC6 243 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 SPATA16Q9BXB7 569 aa5.15□□□□□ -1.59
LRIT3-201ENST00000327908 NEUROG2Q9H2A3 272 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms