RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 MAST2Q6P0Q8 1798 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 NDST3O95803 873 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 EDN1P05305 212 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 EDNRBP24530 442 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 HOXD10P28358 340 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 SOAT1P35610 550 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 MAP2K5Q13163 448 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 ZNF621Q6ZSS3 439 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 HAPLN3Q96S86 360 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 BBS2Q9BXC9 721 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 ROGDIQ9GZN7 287 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 TXNRD2Q9NNW7 524 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 H3BMM5 538 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 ARHGEF9O43307 516 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 ALDH1A1P00352 501 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 EPB42P16452 691 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 YBEYP58557 167 aaPredicted RBP14.71□□□□□ -0.06
TCOF1-201ENST00000323668 ERI1Q8IV48 349 aaKnown RBP14.71□□□□□ -0.06
TCOF1-201ENST00000323668 OSBPL2Q9H1P3 480 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 ARL15Q9NXU5 204 aa14.71□□□□□ -0.06
TCOF1-201ENST00000323668 GNG14A0A1W2PPG7 69 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 ZBTB14O43829 449 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 HSMCR30P0CW71 290 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 SOX6P35712 828 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 GMPRP36959 345 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 PITX1P78337 314 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-201ENST00000323668 LMCD1Q9NZU5 365 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 PNMA8BQ9ULN7 279 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-201ENST00000323668 OR6B1O95007 311 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 MAGEA6P43360 314 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 RFX4Q33E94 735 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 STX19Q8N4C7 294 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 UTP15Q8TED0 518 aaKnown RBP14.7□□□□□ -0.06
TCOF1-201ENST00000323668 GPR21Q99679 349 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 SLC39A3Q9BRY0 314 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 ASB8Q9H765 288 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 CNOT6Q9ULM6 557 aaKnown RBP14.7□□□□□ -0.06
TCOF1-201ENST00000323668 G3V2T6 193 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 IRAK2O43187 625 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 MERTKQ12866 999 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 PARP15Q460N3 678 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 REEP1Q9H902 201 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 SLC2A6Q9UGQ3 507 aa14.7□□□□□ -0.06
TCOF1-201ENST00000323668 ANXA5P08758 320 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 POU1F1P28069 291 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 PBX3P40426 434 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 GSSP48637 474 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 AP5B1Q2VPB7 878 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 PERM1Q5SV97 790 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 THAP5Q7Z6K1 395 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 OSTM1Q86WC4 334 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 MARVELD2Q8N4S9 558 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 DCBLD1Q8N8Z6 715 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 ADGRE2Q9UHX3 823 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 LAMB1P07942 1786 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 GOT2P00505 430 aaKnown RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 HLA-DQB2P05538 268 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 GSNP06396 782 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CKMP06732 381 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 MC4RP32245 332 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CRY1Q16526 586 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 HIST2H2ACQ16777 129 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CTC1Q2NKJ3 1217 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 HIST2H2AA3Q6FI13 130 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 C16orf59Q7L2K0 433 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 ARRDC4Q8NCT1 418 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 TPD52L3Q96J77 140 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 OXCT2Q9BYC2 517 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CIDEBQ9UHD4 219 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 NPEPPSL1A6NEC2 478 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 FAM163BP0C2L3 166 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 IL4RP24394 825 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 LSM3P62310 102 aaKnown RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 HERVK_113P63132 956 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 BCL2L1Q07817 233 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 TLR1Q15399 786 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 TAZQ16635 292 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 SCAMP5Q8TAC9 235 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 HMCESQ96FZ2 354 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 ERVK-6Q9BXR3 956 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 AKTIPQ9H8T0 292 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 PALMDQ9NP74 551 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CD320Q9NPF0 282 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 SH3BP4Q9P0V3 963 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 AGO1Q9UL18 857 aaKnown RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 TLR5O60602 858 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 KRT75O95678 551 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 OR4Q2P0C623 313 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 UROSP10746 265 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 KCNE1P15382 129 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 NCK1P16333 377 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CAPGP40121 348 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 NDST2P52849 883 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 FCGRTP55899 365 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CCDC85BQ15834 202 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 OR9I1Q8NGQ6 314 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 MCOLN3Q8TDD5 553 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms