RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 INHBCP55103 352 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SAMD4BQ5PRF9 694 aaKnown RBP17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SPATA31D4Q6ZUB0 917 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 CDKN2AIPNLQ96HQ2 116 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 TRMOQ9BU70 441 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 CCDC68Q9H2F9 335 aa17.38■□□□□ 0.37
COL9A1-201ENST00000320755 SAC3D1A6NKF1 404 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 RPP40O75818 363 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 TNFAIP8O95379 198 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 MTHFD2P13995 350 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 CES1P23141 567 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 RGRP47804 291 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 RPS24P62847 133 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 TSNQ15631 228 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 HABP4Q5JVS0 413 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 SLC24A5Q71RS6 500 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 ZFAND2BQ8WV99 257 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 L3HYPDHQ96EM0 354 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 BPIFA1Q9NP55 256 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 SARS2Q9NP81 518 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 GALPQ9UBC7 116 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 IKZF3Q9UKT9 509 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 TBC1D30Q9Y2I9 924 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 SPO11Q9Y5K1 396 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 CDC7O00311 574 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 ANGPT2O15123 496 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 TSPAN3O60637 253 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 GPX3P22352 226 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
COL9A1-201ENST00000320755 DIO3P55073 304 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 C6orf10Q5SRN2 563 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 SPPL2CQ8IUH8 684 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 GRIN3AQ8TCU5 1115 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 BRSK1Q8TDC3 778 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 VCX3AQ9NNX9 186 aa17.37■□□□□ 0.37
COL9A1-201ENST00000320755 IGLV3-10A0A075B6K4 115 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 ENPP3O14638 875 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PIM1P11309 404 aaPredicted RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 CAPN3P20807 821 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 TACR2P21452 398 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PRDX3P30048 256 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 AGTR2P50052 363 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PARP15Q460N3 678 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 RSPO2Q6UXX9 243 aaPredicted RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 EFHBQ8N7U6 833 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PCYOX1LQ8NBM8 494 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 FUBP3Q96I24 572 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 MPP4Q96JB8 637 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PRICKLE1Q96MT3 831 aaPredicted RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 TMEM79Q9BSE2 394 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 TUBB1Q9H4B7 451 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PIF1Q9H611 641 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 CAAP1Q9H8G2 361 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 MRPL40Q9NQ50 206 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 MAP10Q9P2G4 905 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 CD300AQ9UGN4 299 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PRAMEF11O60813 436 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 FGF1P05230 155 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 HLA-DPA1P20036 260 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 ATP6V1B2P21281 511 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 DSC1Q08554 894 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 IKBKEQ14164 716 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 MBTPS1Q14703 1052 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 FUT11Q495W5 492 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 RNF19BQ6ZMZ0 732 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 ZBTB49Q6ZSB9 765 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 STON2Q8WXE9 905 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 LINC01599Q8WXQ3 324 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PBXIP1Q96AQ6 731 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 VPS33AQ96AX1 596 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 NSMCE3Q96MG7 304 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 DDX18Q9NVP1 670 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 FNIP2Q9P278 1114 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 TMEM181Q9P2C4 612 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 CNOT6Q9ULM6 557 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 PCDHGC4Q9Y5F7 938 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 F5H5T6 163 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 NDUFS3O75489 264 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 WISP3O95389 354 aaPredicted RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 CKBP12277 381 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 RPL10P27635 214 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 APLP1P51693 650 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 GALNT1Q10472 559 aaPredicted RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 FBXO39Q8N4B4 442 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 DNAJB14Q8TBM8 379 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 DGCR14Q96DF8 476 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 GPR21Q99679 349 aa17.36■□□□□ 0.37
COL9A1-201ENST00000320755 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
COL9A1-201ENST00000320755 NME4O00746 187 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 C8BP07358 591 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
COL9A1-201ENST00000320755 STC1P52823 247 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 RPL26P61254 145 aaKnown RBP17.35■□□□□ 0.37
COL9A1-201ENST00000320755 CLCQ05315 142 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 PTPRNQ16849 979 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 MYLK3Q32MK0 819 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 ABI1Q8IZP0 508 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 MIER2Q8N344 545 aa17.35■□□□□ 0.37
COL9A1-201ENST00000320755 AARSD1Q9BTE6 412 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms