RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CXorf57Q6NSI4 855 aaKnown RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 SDCCAG8Q86SQ7 713 aaPredicted RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PPP2R3CQ969Q6 453 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 RMDN1Q96DB5 314 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 TRMOQ9BU70 441 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 SPATS2LQ9NUQ6 558 aaKnown RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 AHCYL1O43865 530 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PSME3P61289 254 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 ARF5P84085 180 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 BFSP2Q13515 415 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 HECTD3Q5T447 861 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PAOXQ6QHF9 649 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 LINGO4Q6UY18 593 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 GLT6D1Q7Z4J2 308 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 FUNDC1Q8IVP5 155 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 PIANPQ8IYJ0 282 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 CLSTN3Q9BQT9 956 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 RIMS3Q9UJD0 308 aa20.56■□□□□ 0.88
TTC39C-202ENST00000317571 AGO1Q9UL18 857 aaKnown RBP20.56■□□□□ 0.88
TTC39C-202ENST00000317571 CBX4O00257 560 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 BCAS2O75934 225 aaPredicted RBP20.55■□□□□ 0.88
TTC39C-202ENST00000317571 RHOCP08134 193 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 BMP1P13497 986 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 PMLP29590 882 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 PSAPL1Q6NUJ1 521 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 FBXL19Q6PCT2 694 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 LPCAT1Q8NF37 534 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 C19orf60Q96EN9 201 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 TUBB1Q9H4B7 451 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 POPDC3Q9HBV1 291 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 COL4A6Q14031 1691 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 SNAP91O60641 907 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 ALDH1A3P47895 512 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 PDAP1Q13442 181 aaKnown RBP20.55■□□□□ 0.88
TTC39C-202ENST00000317571 RNF168Q8IYW5 571 aaPredicted RBP20.55■□□□□ 0.88
TTC39C-202ENST00000317571 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 BIRC8Q96P09 236 aa20.55■□□□□ 0.88
TTC39C-202ENST00000317571 MRPL9Q9BYD2 267 aaKnown RBP20.55■□□□□ 0.88
TTC39C-202ENST00000317571 UTP6Q9NYH9 597 aaKnown RBP20.55■□□□□ 0.88
TTC39C-202ENST00000317571 CAPN8A6NHC0 703 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 GPR39O43194 453 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 CLDN11O75508 207 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 LAMB3Q13751 1172 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 PHYKPLQ8IUZ5 450 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 RHEBL1Q8TAI7 183 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 SLC45A3Q96JT2 553 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 TFB2MQ9H5Q4 396 aaKnown RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 AKTIPQ9H8T0 292 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 SCUBE2Q9NQ36 999 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 GMPR2Q9P2T1 348 aaKnown RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 SARDHQ9UL12 918 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 ILVBLA1L0T0 632 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 OR1I1O60431 355 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 RHOBTB1O94844 696 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 UQCRBP14927 111 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 PSMA3P25788 255 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 CCL23P55773 120 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 TRAF2Q12933 501 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 RALGDSQ12967 914 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 TAF1AQ15573 450 aaPredicted RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 GRAMD1BQ3KR37 738 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 KLHDC10Q6PID8 442 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 LRRC43Q8N309 656 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 AFAP1L2Q8N4X5 818 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 CDK5RAP1Q96SZ6 601 aaKnown RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 MRPL1Q9BYD6 325 aaKnown RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 PCDHAC1Q9H158 963 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 MID1IP1Q9NPA3 183 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 INTS10Q9NVR2 710 aaKnown RBP20.54■□□□□ 0.88
TTC39C-202ENST00000317571 FKBPLQ9UIM3 349 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 TBC1D30Q9Y2I9 924 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 RAI2Q9Y5P3 530 aa20.54■□□□□ 0.88
TTC39C-202ENST00000317571 CDC7O00311 574 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 CRTAMO95727 393 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 MTA1Q13330 715 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 TSNQ15631 228 aaKnown RBP20.53■□□□□ 0.88
TTC39C-202ENST00000317571 RNF219Q5W0B1 726 aaPredicted RBP20.53■□□□□ 0.88
TTC39C-202ENST00000317571 CLYBLQ8N0X4 340 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 BBS5Q8N3I7 341 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PLD4Q96BZ4 506 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 GPR21Q99679 349 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 CWH43Q9H720 699 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 BPIFA1Q9NP55 256 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PAPOLBQ9NRJ5 636 aaKnown RBP20.53■□□□□ 0.88
TTC39C-202ENST00000317571 ADA2Q9NZK5 511 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PDP2Q9P2J9 529 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PRSS51A0A1B0GVH4 220 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PIP5K1BO14986 540 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 TRIM24O15164 1050 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PSMD8P48556 350 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 PLD1Q13393 1074 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 GRB7Q14451 532 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 SLC30A9Q6PML9 568 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 AFTPHQ6ULP2 937 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 RETREG3Q86VR2 466 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 TRPC4APQ8TEL6 797 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 KIAA1191Q96A73 305 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 SLC39A3Q9BRY0 314 aa20.53■□□□□ 0.88
TTC39C-202ENST00000317571 COPS7BQ9H9Q2 264 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms