RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 INPP5AQ14642 412 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 TCEA2Q15560 299 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 CYP1B1Q16678 543 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 HLA-BQ31612 363 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 UAP1L1Q3KQV9 507 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 KCTD11Q693B1 232 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 DENND5AQ6IQ26 1287 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 RABEPKQ7Z6M1 372 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 SLC22A18ASQ8N1D0 253 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 OR52K1Q8NGK4 314 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 ATL2Q8NHH9 583 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 PMM1Q92871 262 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 FUBP1Q96AE4 644 aaKnown RBP7.85□□□□□ -1.15
CDC42-201ENST00000315554 DTD2Q96FN9 168 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 LENG8Q96PV6 779 aaPredicted RBP7.85□□□□□ -1.15
CDC42-201ENST00000315554 AGAP2Q99490 1192 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 RIOK2Q9BVS4 552 aaKnown RBP7.85□□□□□ -1.15
CDC42-201ENST00000315554 GPR63Q9BZJ6 419 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 ABCG8Q9H221 673 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 GAREM1Q9H706 876 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
CDC42-201ENST00000315554 HOMER3Q9NSC5 361 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 PAK5Q9P286 719 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 AAR2Q9Y312 384 aaKnown RBP7.85□□□□□ -1.15
CDC42-201ENST00000315554 TRPM6Q9BX84 2022 aa7.85□□□□□ -1.15
CDC42-201ENST00000315554 GVINP1Q7Z2Y8 2422 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ADAMTS9Q9P2N4 1935 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 LRRK1Q38SD2 2015 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 USP34Q70CQ2 3546 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TCRBV7S3A2A0A539 114 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TTC36A6NLP5 189 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 C4orf47A7E2U8 309 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 CCL22O00626 93 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 INPP4BO15327 924 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 SDC3O75056 442 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 LRP3O75074 770 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ZNF189O75820 626 aaPredicted RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 URI1O94763 535 aaPredicted RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 ECEL1O95672 775 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 AP2A1O95782 977 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 FGF1P05230 155 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 APRTP07741 180 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 NUDT1P36639 197 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 FDFT1P37268 417 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 PAFAH1B1P43034 410 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 CTSKP43235 329 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TMPRSS15P98073 1019 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 PDE1CQ14123 709 aaPredicted RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 SEPT6Q14141 434 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 KCTD16Q68DU8 428 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 RAET1GQ6H3X3 334 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 RANBP10Q6VN20 620 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 KYAT3Q6YP21 454 aaKnown RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 GLT6D1Q7Z4J2 308 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TECPR1Q7Z6L1 1165 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ABI3BPQ7Z7G0 1075 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TRIM74Q86UV6 250 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 CBARPQ8N350 705 aaPredicted RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 TTC30BQ8N4P2 665 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 MINDY1Q8N5J2 469 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 MFSD2AQ8NA29 543 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 DENND6BQ8NEG7 585 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 CCHCR1Q8TD31 782 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ASB12Q8WXK4 309 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 AP2M1Q96CW1 435 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 LYSMD1Q96S90 227 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TRIM51Q9BSJ1 452 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 C1QTNF7Q9BXJ2 289 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 LRRC40Q9H9A6 602 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ZFYVE1Q9HBF4 777 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 MAGEE1Q9HCI5 957 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 PRM3Q9NNZ6 103 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ARFGAP3Q9NP61 516 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 TPX2Q9ULW0 747 aaKnown RBP7.84□□□□□ -1.15
CDC42-201ENST00000315554 HS3ST3A1Q9Y663 406 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 ARL5AQ9Y689 179 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 RALGAPA1Q6GYQ0 2036 aa7.84□□□□□ -1.15
CDC42-201ENST00000315554 PCDH15Q96QU1 1955 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 FRYLO94915 3013 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 FAM186AA6NE01 2351 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 PSMD11O00231 422 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 CDX4O14627 284 aaPredicted RBP7.83□□□□□ -1.16
CDC42-201ENST00000315554 GPR39O43194 453 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 EPOP01588 193 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 SYPP08247 313 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 ZNF30P17039 623 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 BPIP17213 487 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 VAMP1P23763 118 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 PTGIRP43119 386 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 GPR1P46091 355 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 SPINT3P49223 89 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 RPIAP49247 311 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 FNTAP49354 379 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 THOP1P52888 689 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 SESN2P58004 480 aaPredicted RBP7.83□□□□□ -1.16
CDC42-201ENST00000315554 PFN3P60673 137 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 SEMA5AQ13591 1074 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 FZD2Q14332 565 aa7.83□□□□□ -1.16
CDC42-201ENST00000315554 POU6F1Q14863 301 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms