RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CETN2P41208 172 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 PNPLA4P41247 253 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 WSCD1Q658N2 575 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 CEP57Q86XR8 500 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 TMEM86AQ8N2M4 240 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 RTL3Q8N8U3 475 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SLC22A17Q8WUG5 538 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 DGCR14Q96DF8 476 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 HEXIM2Q96MH2 286 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 MRPS26Q9BYN8 205 aaKnown RBP7.83□□□□□ -1.16
CNOT4-201ENST00000315544 RRN3Q9NYV6 651 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 VTI1BQ9UEU0 232 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 SFMBT1Q9UHJ3 866 aa7.83□□□□□ -1.16
CNOT4-201ENST00000315544 TAPBPO15533 448 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 DCXO43602 365 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 KRT38O76015 456 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF37AP17032 561 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 HOXA9P31269 272 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CLNS1AP54105 237 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RAB10P61026 200 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 FZD5Q13467 585 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 MS4A13Q5J8X5 152 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 SBSNQ6UWP8 590 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 Q6ZNB5 142 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RPS27LQ71UM5 84 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RTL10Q7L3V2 364 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TMEM179BQ7Z7N9 219 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 KCNMB4Q86W47 210 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 FAM131BQ86XD5 332 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ZBTB8OSQ8IWT0 167 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TRIM42Q8IWZ5 723 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 MFSD4AQ8N468 514 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 EFCAB3Q8N7B9 438 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 DLG3Q92796 817 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 IGSF8Q969P0 613 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CFAP36Q96G28 342 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 LRRC3Q9BY71 257 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PBX4Q9BYU1 374 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RPF2Q9H7B2 306 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 NANOGQ9H9S0 305 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 GLOD4Q9HC38 313 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 USE1Q9NZ43 259 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 SLAMF8Q9P0V8 285 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PTBP2Q9UKA9 531 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CDH9Q9ULB4 789 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CNOT6Q9ULM6 557 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 EXO1Q9UQ84 846 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ZSCAN9O15535 394 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PRPSAP2O60256 369 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ALPLP05186 524 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ACPPP15309 386 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 SDC4P31431 198 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 GGT5P36269 586 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TGFBR2P37173 567 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PRKCQQ04759 706 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 AQP6Q13520 282 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CTU2Q2VPK5 515 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CXorf57Q6NSI4 855 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 DCUN1D2Q6PH85 259 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RBM23Q86U06 439 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 GALNT13Q8IUC8 556 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 KIAA1958Q8N8K9 716 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF668Q96K58 619 aaPredicted RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 AMBRA1Q9C0C7 1298 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 STARD7Q9NQZ5 370 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CIDEBQ9UHD4 219 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 USP22Q9UPT9 525 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TLR6Q9Y2C9 796 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TRPV2Q9Y5S1 764 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 A0A0U1RQS6 177 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 C17orf102A2RUQ5 167 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 JRKO75564 520 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ATE1O95260 518 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 EPOP01588 193 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 SLC6A4P31645 630 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 HERVK_113P63132 956 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 POU4F1Q01851 419 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 GRB7Q14451 532 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 NOMO2Q5JPE7 1267 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PCID2Q5JVF3 399 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 VARS2Q5ST30 1063 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 LRIF1Q5T3J3 769 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 UGT3A1Q6NUS8 523 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 CAPN12Q6ZSI9 719 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 DEFB107AQ8IZN7 70 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 TDRD5Q8NAT2 981 aaKnown RBP7.82□□□□□ -1.16
CNOT4-201ENST00000315544 RCN3Q96D15 328 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 KIF12Q96FN5 646 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF599Q96NL3 588 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 ERVK-6Q9BXR3 956 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PCTPQ9UKL6 214 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CNOT4-201ENST00000315544 PCDH15Q96QU1 1955 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 DOCK8Q8NF50 2099 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PRR19A6NJB7 356 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 LSM1O15116 133 aaKnown RBP7.81□□□□□ -1.16
CNOT4-201ENST00000315544 PMPCBO75439 489 aa7.81□□□□□ -1.16
CNOT4-201ENST00000315544 TROVE2P10155 538 aaKnown RBP eCLIP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms