RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SERPINB5P36952 375 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 CTSOP43234 321 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 EPHA5P54756 1037 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 PTPRNQ16849 979 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 ZRANB3Q5FWF4 1079 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 DGKKQ5KSL6 1271 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 LYSMD3Q7Z3D4 306 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 UBE2Q1Q7Z7E8 422 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 PHTF2Q8N3S3 785 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 MAGEC3Q8TD91 643 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 USP13Q92995 863 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 MCUR1Q96AQ8 359 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 BIRC8Q96P09 236 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 GPR63Q9BZJ6 419 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 DENND2DQ9H6A0 471 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 VTI1BQ9UEU0 232 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 PRRC2BQ5JSZ5 2229 aaKnown RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 SLCO1B7G3V0H7 640 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 H3BMM5 538 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 H7C0S8 307 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 DCXO43602 365 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 OR1I1O60431 355 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 PTPN2P17706 415 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 HLA-FP30511 346 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 IRS1P35568 1242 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 MNAT1P51948 309 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 XIAPP98170 497 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 BCL2L1Q07817 233 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 METTL21CQ5VZV1 264 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 PSRC1Q6PGN9 363 aaPredicted RBP18.3■□□□□ 0.52
CCDC43-201ENST00000315286 PAQR3Q6TCH7 311 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 SLC22A9Q8IVM8 553 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 POU5F2Q8N7G0 328 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 CCDC68Q9H2F9 335 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 TAS2R13Q9NYV9 303 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 RHOP08100 348 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 GM2AP17900 193 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 SP100P23497 879 aaPredicted RBP18.3■□□□□ 0.52
CCDC43-201ENST00000315286 HMGCLP35914 325 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 CSNK1DP48730 415 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 TTPAP49638 278 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 STK19P49842 368 aaPredicted RBP18.3■□□□□ 0.52
CCDC43-201ENST00000315286 OR4D1Q15615 310 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 SLC5A9Q2M3M2 681 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 LSM12Q3MHD2 195 aaKnown RBP18.3■□□□□ 0.52
CCDC43-201ENST00000315286 PITRM1Q5JRX3 1037 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 SH2D4BQ5SQS7 431 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 GALPQ9UBC7 116 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 PKP3Q9Y446 797 aa18.3■□□□□ 0.52
CCDC43-201ENST00000315286 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 F8W8V4 182 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 GPR39O43194 453 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 HTRA2O43464 458 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 WFS1O76024 890 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 IMPDH1P20839 514 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 PGM1P36871 562 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 CAMK1Q14012 370 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 PDCD2Q16342 344 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 HERVK_113Q902F9 699 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 GPR21Q99679 349 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 SYTL2Q9HCH5 934 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 TNFRSF12AQ9NP84 129 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 GTSE1Q9NYZ3 720 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 L3MBTL1Q9Y468 752 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 LINC01553A4QN01 128 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 SNUPNO95149 360 aaKnown RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 SRCP12931 536 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 PKMP14618 531 aaKnown RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 EPCAMP16422 314 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 NTHL1P78549 312 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 WASHC2DQ5SRD0 308 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 ASTLQ6HA08 431 aaPredicted RBP18.29■□□□□ 0.52
CCDC43-201ENST00000315286 TAS2R42Q7RTR8 314 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 EXT2Q93063 718 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 GSTO2Q9H4Y5 243 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 TDP1Q9NUW8 608 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 PLA2G4CQ9UP65 541 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 VPS9D1Q9Y2B5 631 aa18.29■□□□□ 0.52
CCDC43-201ENST00000315286 A0A0J9YYE9 177 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 MEI4A8MW99 385 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 IGSF6O95976 241 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 TRBC1P01850 177 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 CCND1P24385 295 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 MAPK8P45983 427 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 RPL26P61254 145 aaKnown RBP18.28■□□□□ 0.52
CCDC43-201ENST00000315286 SULT2A1Q06520 285 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 CTSL3PQ5NE16 218 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 ZNF678Q5SXM1 525 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 FRMD7Q6ZUT3 714 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 PAF1Q8N7H5 531 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 OR2AP1Q8NGE2 309 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 PHOSPHO2Q8TCD6 241 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 VOPP1Q96AW1 172 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 L3HYPDHQ96EM0 354 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 SLC30A3Q99726 388 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 C1orf21Q9H246 121 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 TFB2MQ9H5Q4 396 aaKnown RBP18.28■□□□□ 0.52
CCDC43-201ENST00000315286 RPL26L1Q9UNX3 145 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms