RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 BNIP2Q12982 314 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 DGUOKQ16854 277 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 HACD2Q6Y1H2 254 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 RFPL4BQ6ZWI9 263 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 CUZD1Q86UP6 607 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 LRRC49Q8IUZ0 686 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 PTPN18Q99952 460 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 C8orf4Q9NR00 106 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 MRGBPQ9NV56 204 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 GIMAP2Q9UG22 337 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 ANAPC2Q9UJX6 822 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 PDE10AQ9Y233 779 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 GINS2Q9Y248 185 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 GPSM3Q9Y4H4 160 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 PCDHGA8Q9Y5G5 932 aa18.02■□□□□ 0.47
SPSB4-201ENST00000310546 MFN2O95140 757 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 SEC24AO95486 1093 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 POLR2EP19388 210 aaKnown RBP18.01■□□□□ 0.47
SPSB4-201ENST00000310546 NMBRP28336 390 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 VAC14Q08AM6 782 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 SNX17Q15036 470 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 TMEM132AQ24JP5 1023 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 ADPRMQ3LIE5 342 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 RABL3Q5HYI8 236 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 TAF2Q6P1X5 1199 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PAGE2Q7Z2X7 111 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 C8orf59Q8N0T1 100 aaPredicted RBP18.01■□□□□ 0.47
SPSB4-201ENST00000310546 HOPXQ9BPY8 73 aaPredicted RBP18.01■□□□□ 0.47
SPSB4-201ENST00000310546 BCO2Q9BYV7 579 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PRDM12Q9H4Q4 367 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 CPNE5Q9HCH3 593 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PCDHB3Q9Y5E6 796 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 DYRK3O43781 588 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PCNAP12004 261 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 ENDOUP21128 410 aaKnown RBP18.01■□□□□ 0.47
SPSB4-201ENST00000310546 BDNFP23560 247 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 SLC6A2P23975 617 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 ARL4AP40617 200 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 SERPINB10P48595 397 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 TRPC1P48995 793 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 TRIP11Q15643 1979 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 LDLRAD1Q5T700 205 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 STK32CQ86UX6 486 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 SLC30A3Q99726 388 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 CLSTN3Q9BQT9 956 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 RHOBTB2Q9BYZ6 727 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
SPSB4-201ENST00000310546 CHST12Q9NRB3 414 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 CPA4Q9UI42 421 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 KCNH4Q9UQ05 1017 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PRELID1Q9Y255 219 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 TESMINQ9Y4I5 508 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 PMF1-BGLAPU3KQ54 211 aa18.01■□□□□ 0.47
SPSB4-201ENST00000310546 NDUFS2O75306 463 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 AHSGP02765 367 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ITGB3P05106 788 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 GSNP06396 782 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 SUPT20HL2P0C7V6 817 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 VDRP11473 427 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 AGXTP21549 392 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 KCNA5P22460 613 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CD40LGP29965 261 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CD68P34810 354 aaPredicted RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 ARSFP54793 590 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 GP2P55259 537 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 CTBP1Q13363 440 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 AASDHQ4L235 1098 aaPredicted RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 PRAMEF19Q5SWL8 479 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CCDC103Q8IW40 242 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 OR6Q1Q8NGQ2 317 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 PCYT2Q99447 389 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 BDH2Q9BUT1 245 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CHID1Q9BWS9 393 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ITM2CQ9NQX7 267 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 UBP1Q9NZI7 540 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 SIX4Q9UIU6 781 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CPSF3Q9UKF6 684 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 PCDHGA11Q9Y5H2 935 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 A0A0G2JMZ2 1700 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 RAD51BO15315 384 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 TBX1O43435 398 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 KCNK2O95069 426 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 PGK1P00558 417 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 KRT8P05787 483 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ALDOCP09972 364 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 HSD17B1P14061 328 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CAPN3P20807 821 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ARL2P36404 184 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ALDH7A1P49419 539 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 CLK3P49761 638 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 HIST2H2ACQ16777 129 aaPredicted RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 ZNF280DQ6N043 979 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 TBC1D21Q8IYX1 336 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
SPSB4-201ENST00000310546 RHOJQ9H4E5 214 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
SPSB4-201ENST00000310546 HUS1O60921 280 aa17.99■□□□□ 0.47
SPSB4-201ENST00000310546 TXNP10599 105 aaKnown RBP17.99■□□□□ 0.47
SPSB4-201ENST00000310546 TCF3P15923 654 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms