RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 FRA10AC1Q70Z53 315 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 FKBP9P1Q75LS8 142 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 OR13C4Q8NGS5 318 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 HEXDCQ8WVB3 486 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 APBB2Q92870 758 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 BORCS5Q969J3 196 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 PPM1MQ96MI6 270 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 APOL5Q9BWW9 433 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 C1orf21Q9H246 121 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 ARL5AQ9Y689 179 aa12.66□□□□□ -0.38
RETREG3-201ENST00000309428 SLCO1B7G3V0H7 640 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 VILLO15195 856 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
RETREG3-201ENST00000309428 KCNQ1P51787 676 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 TAF10Q12962 218 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 DNASE1L3Q13609 305 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 FGD3Q5JSP0 725 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 C4orf22Q6V702 233 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 LGI2Q8N0V4 545 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 RAD21L1Q9H4I0 556 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 K7EPI3 171 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 GPR182O15218 404 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 CPOXP36551 454 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 NEK2P51955 445 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 OTUD1Q5VV17 481 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-201ENST00000309428 CUZD1Q86UP6 607 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 KBTBD6Q86V97 674 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 ERI1Q8IV48 349 aaKnown RBP12.65□□□□□ -0.38
RETREG3-201ENST00000309428 GAB3Q8WWW8 586 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 KLHL32Q96NJ5 620 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 C9orf16Q9BUW7 83 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 ITM2CQ9NQX7 267 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 VTI1BQ9UEU0 232 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 PCDHGC4Q9Y5F7 938 aa12.65□□□□□ -0.38
RETREG3-201ENST00000309428 A0A0J9YYE9 177 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 E5RI56 91 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 DPYSL4O14531 572 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 CABYRO75952 493 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 ALOX12P18054 663 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 LIMK2P53671 638 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 TPTEP56180 551 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 ATP6AP1LQ52LC2 224 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 REP15Q6BDI9 236 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 ZBTB8BQ8NAP8 495 aaPredicted RBP12.65□□□□□ -0.39
RETREG3-201ENST00000309428 SMYD1Q8NB12 490 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 TEKT5Q96M29 485 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 KCNA7Q96RP8 456 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 STN1Q9H668 368 aaKnown RBP12.65□□□□□ -0.39
RETREG3-201ENST00000309428 WDR6Q9NNW5 1121 aaKnown RBP12.65□□□□□ -0.39
RETREG3-201ENST00000309428 CNGB3Q9NQW8 809 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 ATAD3AQ9NVI7 634 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 MOCS1Q9NZB8 636 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 CD274Q9NZQ7 290 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 CNOT6Q9ULM6 557 aaKnown RBP12.65□□□□□ -0.39
RETREG3-201ENST00000309428 SLC8A2Q9UPR5 921 aa12.65□□□□□ -0.39
RETREG3-201ENST00000309428 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ZNF682O95780 498 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 WEE1P30291 646 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 FRG1Q14331 258 aaKnown RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ZBTB6Q15916 424 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 MAVSQ7Z434 540 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 LILRA2Q8N149 483 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 PTGR2Q8N8N7 351 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 FNDC5Q8NAU1 212 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 LPCAT1Q8NF37 534 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 OR10Q1Q8NGQ4 319 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RSPH1Q8WYR4 309 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 PLEKHA8Q96JA3 519 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 MUC3BQ9H195 1237 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 A0A1W2PQ67 120 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 A8MU76 341 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 E9PAM4 449 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 B4GAT1O43505 415 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RHOBTB1O94844 696 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 NADKO95544 446 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-201ENST00000309428 CTPS1P17812 591 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 RXRGP48443 463 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 CREB5Q02930 508 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 CMPK2Q5EBM0 449 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 SIX5Q8N196 739 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
RETREG3-201ENST00000309428 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms