RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LLGL1Q15334 1064 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 COL28A1Q2UY09 1125 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 RAET1GQ6H3X3 334 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 C11orf63Q6NUN7 778 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 RAD9BQ6WBX8 426 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 RFX6Q8HWS3 928 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 TMEM139Q8IV31 216 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 KATNAL2Q8IYT4 538 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 GLMNQ92990 594 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 CCDC74AQ96AQ1 378 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 AP2M1Q96CW1 435 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 ZNF830Q96NB3 372 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 CARS2Q9HA77 564 aaKnown RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 SPATS2LQ9NUQ6 558 aaKnown RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 GULP1Q9UBP9 304 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 SUFUQ9UMX1 484 aa19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 EPN1Q9Y6I3 576 aaPredicted RBP19.75■□□□□ 0.75
PDZRN3-202ENST00000308537 PDE2AO00408 941 aaPredicted RBP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 USP12O75317 370 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 NDUFA10O95299 355 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 MPOP05164 745 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 PTPN3P26045 913 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 EIF2S3P41091 472 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 HLTFQ14527 1009 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 SLC14A2Q15849 920 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 TBC1D25Q3MII6 688 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 TEX44Q53QW1 395 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 CERCAMQ5T4B2 595 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 HENMT1Q5T8I9 393 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 CRELD1Q96HD1 420 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 AGAP3Q96P47 875 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 RIOK2Q9BVS4 552 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 ABCG4Q9H172 646 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 SLC25A51Q9H1U9 297 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 ASCL3Q9NQ33 180 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 TRNAU1APQ9NX07 287 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 LHX6Q9UPM6 363 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 DOLKQ9UPQ8 538 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 AK5Q9Y6K8 562 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 DUSP10Q9Y6W6 482 aa19.74■□□□□ 0.75
PDZRN3-202ENST00000308537 PPP1R12AO14974 1030 aaPredicted RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 CST8O60676 142 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 IVLP07476 585 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 AK4P27144 223 aaPredicted RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 GPR1P46091 355 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 LSSP48449 732 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 NR2C2P49116 596 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 SPINT3P49223 89 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 EPHB1P54762 984 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 GALNT3Q14435 633 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 IGF2-ASQ6U949 168 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 RBM44Q6ZP01 1051 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 TAF8Q7Z7C8 310 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 TRIM74Q86UV6 250 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 NRSN1Q8IZ57 195 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 NDUFAF2Q8N183 169 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 FAM46DQ8NEK8 389 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 SPATA22Q8NHS9 363 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 HNRNPLLQ8WVV9 542 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 SCG3Q8WXD2 468 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 ATXN7L3BQ96GX2 97 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 HIC2Q96JB3 615 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 TEKT5Q96M29 485 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 MAK16Q9BXY0 300 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 LACRTQ9GZZ8 138 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 APPL1Q9UKG1 709 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 DNPEPQ9ULA0 475 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 PLEKHM1Q9Y4G2 1056 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 OAS3Q9Y6K5 1087 aaKnown RBP19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 MGAQ8IWI9 3026 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 BPTFQ12830 3046 aa19.73■□□□□ 0.75
PDZRN3-202ENST00000308537 FADS2P1A8MWK0 482 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 MT-CYBP00156 380 aaPredicted RBP19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 FGF1P05230 155 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 ITPKBP27987 946 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 CYLC1P35663 651 aaPredicted RBP19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 C14orf28Q4W4Y0 310 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 TFDP3Q5H9I0 405 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 B3GNT8Q7Z7M8 397 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 NT5DC3Q86UY8 548 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 WDR48Q8TAF3 677 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 MLPHQ9BV36 600 aaPredicted RBP19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 POLR1BQ9H9Y6 1135 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 GLOD4Q9HC38 313 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 TMEM98Q9Y2Y6 226 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 RNF215Q9Y6U7 377 aa19.72■□□□□ 0.75
PDZRN3-202ENST00000308537 C1orf232A0A0U1RR37 186 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 GLB1P16278 677 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 CA4P22748 312 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 ADCY8P40145 1251 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 GNPDA1P46926 289 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 GABREP78334 506 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 CCL7P80098 99 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 CTBSQ01459 385 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 TFDP2Q14188 446 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 PPP2R5EQ16537 467 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 PYCR3Q53H96 274 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 LYSMD3Q7Z3D4 306 aa19.71■□□□□ 0.75
PDZRN3-202ENST00000308537 TMPRSS9Q7Z410 1059 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms