RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RPL38P63173 70 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 C16orf72Q14CZ0 275 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 LRRC74BQ6ZQY2 392 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TMEM26Q6ZUK4 368 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TRIM69Q86WT6 500 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MYCBPQ99417 103 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 C16orf70Q9BSU1 422 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 FUCA2Q9BTY2 467 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 APOBEC3GQ9HC16 384 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 VPS45Q9NRW7 570 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 HAO1Q9UJM8 370 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 CLDN4O14493 209 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 PRMT5O14744 637 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MT-CYBP00156 380 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 BMP6P22004 513 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 ADSSP30520 456 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MANFP55145 182 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 FAM98BQ52LJ0 330 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 PACS1Q6VY07 963 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TPRG1Q6ZUI0 275 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 SERPINA9Q86WD7 417 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MCEMP1Q8IX19 187 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 DPYSL5Q9BPU6 564 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 P2RY13Q9BPV8 354 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 NTPCRQ9BSD7 190 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 GOLGA4Q13439 2230 aaKnown RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 POLD2P49005 469 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TMED1Q13445 227 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TAF5Q15542 800 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 MORN1Q5T089 497 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TMC3Q7Z5M5 1100 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 LDB1Q86U70 411 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 FBXO15Q8NCQ5 510 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 OR2AG1Q9H205 316 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 COPS7AQ9UBW8 275 aa10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 TRPM3Q9HCF6 1732 aaPredicted RBP10.68□□□□□ -0.7
SYNPO2-201ENST00000307142 OR1F1O43749 312 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 PEX11AO75192 247 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 EN2P19622 333 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 GRIA4P48058 902 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CCINQ13939 588 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ATP13A5Q4VNC0 1218 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 R3HCC1LQ7Z5L2 792 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 AMZ2Q86W34 360 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 EBNA1BP2Q99848 306 aaKnown RBP10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SNX13Q9Y5W8 968 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 WNT9AO14904 365 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 KRT8P05787 483 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CCR3P51677 355 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 FBXO5Q9UKT4 447 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 VWA7Q9Y334 891 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 MTMR11A4FU01 709 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 VNN1O95497 513 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 TFPIP10646 304 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CYBAP13498 195 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ARHGAP17Q68EM7 881 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 MAMDC4Q6UXC1 1216 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 GKN2Q86XP6 184 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CROTQ9UKG9 612 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 LINC00032P0C843 101 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ATP6V0D1P61421 351 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 POMZP3Q6PJE2 187 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 NELL1Q92832 810 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CYP2S1Q96SQ9 504 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SLC25A51Q9H1U9 297 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ZC4H2Q9NQZ6 224 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 TAGLN3Q9UI15 199 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 MTF2Q9Y483 593 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CCT8L1PA6NM43 557 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 GBE1Q04446 702 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 RUNX1T1Q06455 604 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ANGPT1Q15389 498 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CCNYL2Q5T2Q4 361 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 CASP12Q6UXS9 341 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 Q6ZVU0 165 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 TCAIMQ8N3R3 496 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ATP6V1C2Q8NEY4 427 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SUV39H2Q9H5I1 410 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ACTR1BP42025 376 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 ACTR1AP61163 376 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SPIRE1Q08AE8 756 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 NAE1Q13564 534 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SEMA5AQ13591 1074 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 HDAC7Q8WUI4 952 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 POLR3BQ9NW08 1133 aaPredicted RBP10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 TMEM216Q9P0N5 145 aa10.67□□□□□ -0.7
SYNPO2-201ENST00000307142 SCN2BO60939 215 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 HLA-EP13747 358 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 AGXTP21549 392 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 BMPR1AP36894 532 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 RXRGP48443 463 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 GSSP48637 474 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 KCNQ1P51787 676 aa10.66□□□□□ -0.7
SYNPO2-201ENST00000307142 LSM12Q3MHD2 195 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms