RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 BCL10O95999 233 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 ZRANB3Q5FWF4 1079 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 AARS2Q5JTZ9 985 aaKnown RBP14.57□□□□□ -0.08
PTPN9-201ENST00000306726 ANKRD34AQ69YU3 496 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM209Q96SK2 561 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 PHF24Q9UPV7 400 aa14.57□□□□□ -0.08
PTPN9-201ENST00000306726 TMA7Q9Y2S6 64 aaKnown RBP14.57□□□□□ -0.08
PTPN9-201ENST00000306726 SCN1AP35498 2009 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 E5RI56 91 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 J3KR12 359 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SYNCRIPO60506 623 aaKnown RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 IPO13O94829 963 aaKnown RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 DIRAS1O95057 198 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ATE1O95260 518 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ESRRBO95718 433 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 PMS2P3Q13401 168 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SIM2Q14190 667 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 AAK1Q2M2I8 961 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SMYD5Q6GMV2 418 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 PKN3Q6P5Z2 889 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SLC39A8Q9C0K1 460 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SACM1LQ9NTJ5 587 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 UXTQ9UBK9 157 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ARL5AQ9Y689 179 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 I6L893 689 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 PSMB9P28065 219 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 KCNC1P48547 511 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 AGTR2P50052 363 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 MAPRE2Q15555 327 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 PCID2Q5JVF3 399 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 C6orf183Q5T699 404 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 LSMEM2Q8N112 164 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 KDM1BQ8NB78 822 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 OR6K2Q8NGY2 324 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 HTRA1Q92743 480 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 C19orf60Q96EN9 201 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SLC25A23Q9BV35 468 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 OSBPL11Q9BXB4 747 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 DUSP16Q9BY84 665 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 NFKBIZQ9BYH8 718 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SMURF2Q9HAU4 748 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 MARCH4Q9P2E8 410 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ARID1BQ8NFD5 2236 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 A0A087WXM4 84 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 IQCF5A8MTL0 148 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 IRF1P10914 325 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 GLDCP23378 1020 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ARSDP51689 593 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SH3BGRP55822 239 aaPredicted RBP14.56□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF554Q86TJ5 538 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 C11orf74Q86VG3 221 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 MARVELD2Q8N4S9 558 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 SPPL2BQ8TCT7 592 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 TCF12Q99081 682 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 MYOCQ99972 504 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 RASSF1Q9NS23 344 aa14.56□□□□□ -0.08
PTPN9-201ENST00000306726 PAGE1O75459 146 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 HLA-DQB2P05538 268 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 CCL5P13501 91 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 IL5RAQ01344 420 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF235Q14590 738 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 NR6A1Q15406 480 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 TMTC4Q5T4D3 741 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 HECTD2Q5U5R9 776 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 ANKRD46Q86W74 232 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 FIBCD1Q8N539 461 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 PCDHGA7Q9Y5G6 932 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 CEPT1Q9Y6K0 416 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SHROOM3Q8TF72 1996 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF682O95780 498 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 PTPN9P43378 593 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 KPNA2P52292 529 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 LBX1P52954 281 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 TRIM32Q13049 653 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 DDX39BQ13838 428 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 TAZQ16635 292 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 AP5B1Q2VPB7 878 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SV2CQ496J9 727 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 GALNT10Q86SR1 603 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF598Q86UK7 904 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 MFSD6LQ8IWD5 586 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SMG8Q8ND04 991 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 ISOC1Q96CN7 298 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 TEKT5Q96M29 485 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 UNC93B1Q9H1C4 597 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 OSBPL2Q9H1P3 480 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 VWA7Q9Y334 891 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 SNX5Q9Y5X3 404 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 HACD1B0YJ81 288 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 LRATO95237 230 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 LTA4HP09960 611 aaKnown RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 HOXC8P31273 242 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 NKX2-5P52952 324 aaPredicted RBP14.55□□□□□ -0.08
PTPN9-201ENST00000306726 CYP4F2P78329 520 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 CAP1Q01518 475 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 CYP4F3Q08477 520 aa14.55□□□□□ -0.08
PTPN9-201ENST00000306726 INSCQ1MX18 579 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms