RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PSME3P61289 254 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 ELAVL2Q12926 359 aaKnown RBP18.6■□□□□ 0.57
RNF139-201ENST00000303545 TSNQ15631 228 aaKnown RBP18.6■□□□□ 0.57
RNF139-201ENST00000303545 SETMARQ53H47 684 aaPredicted RBP18.6■□□□□ 0.57
RNF139-201ENST00000303545 REP15Q6BDI9 236 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 SPATA24Q86W54 205 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 CARNMT1Q8N4J0 409 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 OR6K2Q8NGY2 324 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 KLHL32Q96NJ5 620 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 GPR21Q99679 349 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 CLSTN3Q9BQT9 956 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 TTLL2Q9BWV7 592 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 MED16Q9Y2X0 877 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 NDUFS3O75489 264 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 CDK14O94921 469 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 MZF1P28698 734 aaPredicted RBP18.6■□□□□ 0.57
RNF139-201ENST00000303545 ALDH1A3P47895 512 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 CHSY3Q70JA7 882 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 GALNT7Q86SF2 657 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 ADGRG6Q86SQ4 1221 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 DCBLD1Q8N8Z6 715 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 C19orf60Q96EN9 201 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 SLC22A12Q96S37 553 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 AKTIPQ9H8T0 292 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 NLE1Q9NVX2 485 aaPredicted RBP18.6■□□□□ 0.57
RNF139-201ENST00000303545 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 PCDHGA7Q9Y5G6 932 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 DNAJC15Q9Y5T4 150 aa18.6■□□□□ 0.57
RNF139-201ENST00000303545 NPEPPSL1A6NEC2 478 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 IQCF5A8MTL0 148 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 DNAJA2O60884 412 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 NIPSNAP2O75323 286 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 CRTAMO95727 393 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 LYNP07948 512 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 LINC00032P0C843 101 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 SPATA31D3P0C874 917 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 AGTR2P50052 363 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 GRB7Q14451 532 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 HERC3Q15034 1050 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 PTPRNQ16849 979 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 KIF19Q2TAC6 998 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 ZRANB3Q5FWF4 1079 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 ATXN7L2Q5T6C5 722 aaPredicted RBP18.59■□□□□ 0.57
RNF139-201ENST00000303545 SPATA31D4Q6ZUB0 917 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 CRIPAKQ8N1N5 446 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 SIDT2Q8NBJ9 832 aaKnown RBP18.59■□□□□ 0.57
RNF139-201ENST00000303545 GPR150Q8NGU9 434 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 TDRD1Q9BXT4 1180 aaKnown RBP18.59■□□□□ 0.57
RNF139-201ENST00000303545 RNF112Q9ULX5 631 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 MAGEA13PA6NCF6 341 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 PIP5K1BO14986 540 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 EPOP01588 193 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 EEF1DP29692 281 aaKnown RBP18.59■□□□□ 0.57
RNF139-201ENST00000303545 TWF1Q12792 350 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 SCIMPQ6UWF3 145 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 PQLC1Q8N2U9 271 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 L3HYPDHQ96EM0 354 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 FAR2Q96K12 515 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 ZNF599Q96NL3 588 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 CCDC68Q9H2F9 335 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 SLC24A3Q9HC58 644 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 TRPM5Q9NZQ8 1165 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 FCF1Q9Y324 198 aaKnown RBP18.59■□□□□ 0.57
RNF139-201ENST00000303545 TIMM22Q9Y584 194 aa18.59■□□□□ 0.57
RNF139-201ENST00000303545 SLC22A2O15244 555 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 CLDN11O75508 207 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 C1RP00736 705 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 CTPS1P17812 591 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 MC4RP32245 332 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 ARF5P84085 180 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 SQLEQ14534 574 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 DEFB115Q30KQ5 88 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 UGT3A2Q3SY77 523 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 OR52E8Q6IFG1 317 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 SLC8B1Q6J4K2 584 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 LILRA2Q8N149 483 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 LPGAT1Q92604 370 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 CCDC97Q96F63 343 aaPredicted RBP18.58■□□□□ 0.57
RNF139-201ENST00000303545 ATOH8Q96SQ7 321 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 UNC93B1Q9H1C4 597 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 VCXQ9H320 206 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 CACNA2D2Q9NY47 1150 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 MTRRQ9UBK8 725 aa18.58■□□□□ 0.57
RNF139-201ENST00000303545 GOLGA8CPA6NN73 597 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 CLASP2O75122 1294 aaKnown RBP18.58■□□□□ 0.56
RNF139-201ENST00000303545 PRAMEF12O95522 483 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 PRDX3P30048 256 aaKnown RBP18.58■□□□□ 0.56
RNF139-201ENST00000303545 SATB1Q01826 763 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 TRAF2Q12933 501 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 C5orf22Q49AR2 442 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 CYP2R1Q6VVX0 501 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 LARP4Q71RC2 724 aaKnown RBP eCLIP18.58■□□□□ 0.56
RNF139-201ENST00000303545 LRRC43Q8N309 656 aa18.58■□□□□ 0.56
RNF139-201ENST00000303545 MRPL9Q9BYD2 267 aaKnown RBP18.58■□□□□ 0.56
RNF139-201ENST00000303545 UTP6Q9NYH9 597 aaKnown RBP18.58■□□□□ 0.56
RNF139-201ENST00000303545 PSMD13Q9UNM6 376 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms