RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CD72P21854 359 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FASP25445 335 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 NEK3P51956 506 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 DSG1Q02413 1049 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 RSBN1Q5VWQ0 802 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PLEKHA7Q6IQ23 1121 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 KLHL17Q6TDP4 642 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 IZUMO2Q6UXV1 221 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 DNAJB7Q7Z6W7 309 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PPCDCQ96CD2 204 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PTGFRNQ9P2B2 879 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 VPS4AQ9UN37 437 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GRIN2DO15399 1336 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 IL12BP29460 328 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ACTR1BP42025 376 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 IRAK1P51617 712 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ACTR1AP61163 376 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SMYD5Q6GMV2 418 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SLC30A6Q6NXT4 461 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TAC4Q86UU9 113 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 VGLL2Q8N8G2 317 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 OR52J3Q8NH60 311 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MKL1Q969V6 931 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SH3GL2Q99962 352 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CRISPLD1Q9H336 500 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 IKZF2Q9UKS7 526 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 NFKBIEO00221 500 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 GUCY1B2O75343 617 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CSF2RAP15509 400 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CHRNA4P43681 627 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 SKP1P63208 163 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 PPM1JQ5JR12 505 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 DUPD1Q68J44 220 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 DAW1Q8N136 415 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 FRMD8P1Q9BZ68 369 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CHRAC1Q9NRG0 131 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 COPG1Q9Y678 874 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 A0A0A0MRY4 1105 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 TCRBV21S2A2A0A5A6 115 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 HACD1B0YJ81 288 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 RPS24P62847 133 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 PEX6Q13608 980 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CCDC153Q494R4 210 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CLEC6AQ6EIG7 209 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 ANKRD46Q86W74 232 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 UNC93AQ86WB7 457 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 UBR7Q8N806 425 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 SPATA13Q96N96 652 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 KIFC1Q9BW19 673 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 HPSEQ9Y251 543 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MRPS17Q9Y2R5 130 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 OR51F1A6NGY5 319 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 HNRNPRO43390 633 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 GCATO75600 419 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 C1orf94Q6P1W5 598 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 SLC43A3Q8NBI5 491 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 OSCP1Q8WVF1 389 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 FNDC11Q9BVV2 318 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 COLEC10Q9Y6Z7 277 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MMP20O60882 483 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 POU2F1P14859 743 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 GRIA3P42263 894 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MPP1Q00013 466 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 C1DQ13901 141 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 ACAP1Q15027 740 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 PDZK1Q5T2W1 519 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 ESRP1Q6NXG1 681 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 PMF1Q6P1K2 205 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MIEF2Q96C03 454 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MBOAT7Q96N66 472 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 B4GALT4O60513 344 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 MPSTP25325 297 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 TTPAP49638 278 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 NR0B1P51843 470 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 C17orf64Q86WR6 236 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 APOLD1Q96LR9 279 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 TBX5Q99593 518 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 SMIM31A0A1B0GVY4 71 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 A0A1W2PQ45 241 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 A0A1W2PQY0 241 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 KHDRBS3O75525 346 aaKnown RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 FGF18O76093 207 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 ZBTB48P10074 688 aaPredicted RBP7.78□□□□□ -1.16
SCN9A-201ENST00000303354 EPHA3P29320 983 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 HOXC12P31275 282 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CHAF1BQ13112 559 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 NAB1Q13506 487 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 HECTD2Q5U5R9 776 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 SATL1Q86VE3 508 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 AMIGO3Q86WK7 504 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 KRT73Q86Y46 540 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 OFCC1Q8IZS5 231 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 CLIP4Q8N3C7 705 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 ACTRT1Q8TDG2 376 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 QKIQ96PU8 341 aaKnown RBP eCLIP7.78□□□□□ -1.161e-6■■■■□ 21.1
SCN9A-201ENST00000303354 KCNK6Q9Y257 313 aa7.78□□□□□ -1.16
SCN9A-201ENST00000303354 RFXANKO14593 260 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms