RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NPHS1O60500 1241 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 PGLSO95336 258 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 PIGNO95427 931 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 CHRNGP07510 517 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 AOC1P19801 751 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 EPHB1P54762 984 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 DNAJB13P59910 316 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 ARHGAP8P85298 464 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TUBB3Q13509 450 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 RAB30Q15771 203 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 CDKN3Q16667 212 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TECRLQ5HYJ1 363 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 SEL1L3Q68CR1 1132 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 EPGNQ6UW88 154 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 MAVSQ7Z434 540 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TREML1Q86YW5 311 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TMPRSS6Q8IU80 811 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 SLC22A9Q8IVM8 553 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TEX9Q8N6V9 391 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 AGR3Q8TD06 166 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 SGF29Q96ES7 293 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 LRRC3BQ96PB8 259 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TUBGCP5Q96RT8 1024 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TCF12Q99081 682 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 MAGEE1Q9HCI5 957 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 OBP2AQ9NY56 170 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 TAS2R1Q9NYW7 299 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 VTI1BQ9UEU0 232 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 B2RBV5 119 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 HDAC3O15379 428 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 GSC2O15499 205 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 SLC4A1P02730 911 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 SRCP12931 536 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 CDKN2DP55273 166 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 KDSRQ06136 332 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
PDPN-201ENST00000294489 DGKKQ5KSL6 1271 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 VWA5B1Q5TIE3 1220 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 METTL21CQ5VZV1 264 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 ADIPOR2Q86V24 386 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 EFHBQ8N7U6 833 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 PNPLA1Q8N8W4 532 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 FAM13CQ8NE31 585 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 RSPRY1Q96DX4 576 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 CNDP1Q96KN2 507 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 CADM1Q9BY67 442 aaKnown RBP9.13□□□□□ -0.95
PDPN-201ENST00000294489 CPEB1Q9BZB8 566 aaKnown RBP9.13□□□□□ -0.95
PDPN-201ENST00000294489 LINC00597Q9H2U6 94 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 NKX2-4Q9H2Z4 354 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 POPDC3Q9HBV1 291 aa9.13□□□□□ -0.95
PDPN-201ENST00000294489 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.13□□□□□ -0.95
PDPN-201ENST00000294489 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 UBA6A0AVT1 1052 aaPredicted RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 A8MUI8 341 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 F8W8V4 182 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 MATN2O00339 956 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 STX7O15400 261 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 HOXC11O43248 304 aaPredicted RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 NDUFS3O75489 264 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 WFS1O76024 890 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 IPO13O94829 963 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 CISD3P0C7P0 127 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 TFEBP19484 476 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 NCF2P19878 526 aaPredicted RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 FDXRP22570 491 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 MPSTP25325 297 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 PFKPQ01813 784 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 SULT2A1Q06520 285 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 TRIM67Q6ZTA4 783 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 TXNDC5Q8NBS9 432 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 ECHDC3Q96DC8 303 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 MIPEPQ99797 713 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 PLK2Q9NYY3 685 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 MRPS23Q9Y3D9 190 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 WASH3PC4AMC7 463 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 TYRP14679 529 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 CCND1P24385 295 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 ABL2P42684 1182 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 CPA2P48052 419 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 NRIP1P48552 1158 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 SUOXP51687 545 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 MXRA7P84157 204 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 SEMA3AQ14563 771 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 WASHC2DQ5SRD0 308 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 ATXN7L2Q5T6C5 722 aaPredicted RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 ZNF697Q5TEC3 545 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 PAF1Q8N7H5 531 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 OSCP1Q8WVF1 389 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 ANKRD49Q8WVL7 239 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 LYSMD1Q96S90 227 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 AARSD1Q9BTE6 412 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 MMADHCQ9H3L0 296 aaPredicted RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 EML4Q9HC35 981 aaKnown RBP9.12□□□□□ -0.95
PDPN-201ENST00000294489 SYTL2Q9HCH5 934 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 TCF7L2Q9NQB0 619 aa9.12□□□□□ -0.95
PDPN-201ENST00000294489 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms