RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CLCN5P51795 746 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 CUZD1Q86UP6 607 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 SFRP1Q8N474 314 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF563Q8TA94 476 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 PPP3R2Q96LZ3 170 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 DDX4Q9NQI0 724 aaKnown RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 FKBP14Q9NWM8 211 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 PSMD13Q9UNM6 376 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 hCG_1818297A0A087WSY0 165 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 TCRBV9S1A1TA0A576 114 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 AZIN1O14977 448 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 CTSKP43235 329 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ACVR2BQ13705 512 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 OTOP3Q7RTS5 596 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 LZTR1Q8N653 840 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 DNERQ8NFT8 737 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ZSCAN5AQ9BUG6 496 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 NEK6Q9HC98 313 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ISM1B1AKI9 464 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 ITGAVP06756 1048 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 BMP7P18075 431 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 S100A2P29034 98 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 FMO1Q01740 532 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 BNIP2Q12982 314 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 NFE2Q16621 373 aaPredicted RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 PPM1JQ5JR12 505 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 KIAA0319LQ8IZA0 1049 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 PTCD2Q8WV60 388 aaKnown RBP16.11■□□□□ 0.17
SSRP1-202ENST00000293880 KAT2AQ92830 837 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 RNF157Q96PX1 679 aa16.11■□□□□ 0.17
SSRP1-202ENST00000293880 CCNDBP1O95273 360 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CHRM5P08912 532 aaPredicted RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 MSANTD1Q6ZTZ1 278 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 GHDCQ8N2G8 530 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 PRELID2Q8N945 189 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 HDAC10Q969S8 669 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 PNPLA8Q9NP80 782 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CORO1CQ9ULV4 474 aaPredicted RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 NOS2P35228 1153 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 PCDH1Q08174 1060 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 JAZF1Q86VZ6 243 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 DCBLD1Q8N8Z6 715 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 LRTOMTQ8WZ04 291 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CXorf40BQ96DE9 158 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 C1QTNF1Q9BXJ1 281 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CORO2BQ9UQ03 480 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 A0A088AWK7 358 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 SLC6A2P23975 617 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TGFBR2P37173 567 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 SMCO1Q147U7 214 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TIGD2Q4W5G0 525 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 FAAH2Q6GMR7 532 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 SUSD6Q92537 303 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 RTKNQ9BST9 563 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 FAIM2Q9BWQ8 316 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TRPV2Q9Y5S1 764 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 ZNF780BQ9Y6R6 833 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 ZSCAN5BA6NJL1 495 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 NARSO43776 548 aaKnown RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 POU2F1P14859 743 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 EFNA1P20827 205 aaPredicted RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 VPS26BQ4G0F5 336 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 HELQQ8TDG4 1101 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 EBPLQ9BY08 206 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 DNMT3LQ9UJW3 386 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TIMM22Q9Y584 194 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 GNB5O14775 395 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CAPGP40121 348 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TXNDC11Q6PKC3 985 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CCDC36Q8IYA8 594 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 PPCDCQ96CD2 204 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 EHD1Q9H4M9 534 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 CDH22Q9UJ99 828 aa16.1■□□□□ 0.17
SSRP1-202ENST00000293880 TOR1BO14657 336 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 MSI1O43347 362 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 OR4L1Q8NH43 312 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 BORCS5Q969J3 196 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 EMC3Q9P0I2 261 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 WWP2O00308 870 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 ACKR2O00590 384 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 FPGTO14772 594 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 BCKDKO14874 412 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 SMAD9O15198 467 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 NDUFS2O75306 463 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 ARHGDIBP52566 201 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 CASP9P55211 416 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 PCSK9Q8NBP7 692 aaKnown RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 ZYG11BQ9C0D3 744 aa16.09■□□□□ 0.17
SSRP1-202ENST00000293880 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.09■□□□□ 0.17
SSRP1-202ENST00000293880 KANSL3Q9P2N6 904 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms