RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PGAM4Q8N0Y7 254 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ZBTB2Q8N680 514 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 RTL3Q8N8U3 475 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 TFAP2BQ92481 460 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 TDRD1Q9BXT4 1180 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 REXO4Q9GZR2 422 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ATP6V1HQ9UI12 483 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CHKBQ9Y259 395 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 SIGLEC1Q9BZZ2 1709 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 PTPRJQ12913 1337 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 SUV39H1O43463 412 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CXCL14O95715 111 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 UMPSP11172 480 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 TSPAN8P19075 237 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ASPAP45381 313 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 GSSP48637 474 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 TRIM25Q14258 630 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CPSF6Q16630 551 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CNSTQ6PJW8 725 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CHSY3Q70JA7 882 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 RAVER1Q8IY67 606 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 OR4K2Q8NGD2 314 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 DNAJC11Q9NVH1 559 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 NDOR1Q9UHB4 597 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 POLR3HQ9Y535 204 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 NPHS1O60500 1241 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 KELP23276 732 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 CORO1AP31146 461 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 AP1S1P61966 158 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 USP46P62068 366 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ATP1A4Q13733 1029 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 C16orf62Q7Z3J2 963 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 S100ZQ8WXG8 99 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ZNHIT2Q9UHR6 403 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 LTN1O94822 1766 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ALOX12P18054 663 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 GSTT1P30711 240 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PNLIPRP1P54315 467 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ELP6Q0PNE2 266 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 RFTN2Q52LD8 501 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF57Q68EA5 555 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 SMYD5Q6GMV2 418 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 RHBDF2Q6PJF5 856 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 AGMOQ6ZNB7 445 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 OR2T12Q8NG77 320 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 MOSPD2Q8NHP6 518 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 CHRAC1Q9NRG0 131 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 GRHL1Q9NZI5 618 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ERGIC3Q9Y282 383 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PER2O15055 1255 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 C22orf31O95567 290 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 IL1BP01584 269 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PTSQ03393 145 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 TSTD2Q5T7W7 516 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ARHGAP22Q7Z5H3 698 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 NMUR2Q9GZQ4 415 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 SAMHD1Q9Y3Z3 626 aaKnown RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 NR2E3Q9Y5X4 410 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 AHCYL1O43865 530 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 UGT2B11O75310 529 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PIAS1O75925 651 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 SMPD1P17405 629 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ZNF618Q5T7W0 954 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 NTAN1Q96AB6 310 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 NDUFB5O43674 189 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 PLIN3O60664 434 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 ATG13O75143 517 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 LRIG2O94898 1065 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 SLC6A2P23975 617 aa12.76□□□□□ -0.37
PTCD1-201ENST00000292478 GNA12Q03113 381 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms