RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF540Q8NDQ6 660 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 FAR1Q8WVX9 515 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CENPIQ92674 756 aaPredicted RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TEKT5Q96M29 485 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TBATAQ96M53 351 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TRIM45Q9H8W5 580 aaPredicted RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 SMIM35A0A1B0GVV1 85 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CCDC154A6NI56 674 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ALDOAP04075 364 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PRKCHP24723 683 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 GRK4P32298 578 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PTPRNQ16849 979 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 INSCQ1MX18 579 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF280DQ6N043 979 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 HEXDCQ8WVB3 486 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 SKA1Q96BD8 255 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TCF12Q99081 682 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 RTKNQ9BST9 563 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 HGH1Q9BTY7 390 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TPK1Q9H3S4 243 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC2A6Q9UGQ3 507 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CNTN6Q9UQ52 1028 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PCDHB7Q9Y5E2 793 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PCDHGA3Q9Y5H0 932 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 RAD54BQ9Y620 910 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ABCB1P08183 1280 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 XIAPP98170 497 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 TAB1Q15750 504 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CRTC3Q6UUV7 619 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ANKRD23Q86SG2 305 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ADCY4Q8NFM4 1077 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 TPD52L3Q96J77 140 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 TRAF6Q9Y4K3 522 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 DHRS12A0PJE2 317 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 E7ESA3 106 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 FFAR3O14843 346 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 GPR42O15529 346 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 SNAP91O60641 907 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 RHOAP61586 193 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CLPBQ9H078 707 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 DERAQ9Y315 318 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 BTAF1O14981 1849 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 A0A087X1B8 175 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 RRM2P31350 389 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 KRT20P35900 424 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 COPZ1P61923 177 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 RPS7P62081 194 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CCL14Q16627 93 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ADCK2Q7Z695 626 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 UGT2B28Q9BY64 529 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 POLR1EQ9GZS1 481 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ABCG8Q9H221 673 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 MARCH7Q9H992 704 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 H3BN98 237 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ALOX5P09917 674 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 XRCC1P18887 633 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CAMKK1Q8N5S9 505 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 PTCD3Q96EY7 689 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC39A3Q9BRY0 314 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 DPY30Q9C005 99 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 CATSPERZQ9NTU4 200 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 RCOR3Q9P2K3 495 aaPredicted RBP12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC9A8Q9Y2E8 581 aa12.54□□□□□ -0.4
SLC6A1-201ENST00000287766 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TCF3P15923 654 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 THOP1P52888 689 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 PRKAA2P54646 552 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 PCLAFQ15004 111 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 LPGAT1Q92604 370 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TAMM41Q96BW9 452 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF778Q96MU6 729 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 AGO3Q9H9G7 860 aaKnown RBP12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 DNAJC28Q9NX36 388 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 FBXW11Q9UKB1 542 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 WBP11Q9Y2W2 641 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms