RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TK2O00142 265 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 PCCBP05166 539 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 EPHA3P29320 983 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 SERPINB1P30740 379 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 PDGFRLQ15198 375 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 DLG2Q15700 870 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ADGRG2Q8IZP9 1017 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF567Q8N184 647 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 RASGEF1CQ8N431 466 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 SVOPQ8N4V2 548 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ZBTB2Q8N680 514 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 AUTS2Q8WXX7 1259 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 LRRC4CQ9HCJ2 640 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 TRAF6Q9Y4K3 522 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 PCDHGA4Q9Y5G9 962 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 RGSL1A5PLK6 1076 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ITGAXP20702 1163 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 JAM2P57087 298 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF792Q3KQV3 632 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 ANXA8L1Q5VT79 327 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 TRABD2AQ86V40 505 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 PRCCQ92733 491 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 MINDY3Q9H8M7 445 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 NOCTQ9UK39 431 aaKnown RBP18.49■□□□□ 0.55
PCDH1-201ENST00000287008 VPS4AQ9UN37 437 aa18.49■□□□□ 0.55
PCDH1-201ENST00000287008 SERPINB7O75635 380 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 PPIBP23284 216 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 SMIM11AP58511 58 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CFAP206Q8IYR0 622 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 SCAIQ8N9R8 606 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 RMND5BQ96G75 393 aaPredicted RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CACNG4Q9UBN1 327 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 COPG1Q9Y678 874 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 DDX3YO15523 660 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 FAM163BP0C2L3 166 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 IDO1P14902 403 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 GPD2P43304 727 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 NDUFA9Q16795 377 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 C2orf27AQ580R0 203 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 RNF44Q7L0R7 432 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 OR52L1Q8NGH7 329 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 MAP1BP46821 2468 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 LRATO95237 230 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 LINC00032P0C843 101 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF24P17028 368 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CDH3P22223 829 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 MAT2AP31153 395 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 IDH2P48735 452 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 PSME3P61289 254 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CYP4F2P78329 520 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 MRPS22P82650 360 aaKnown RBP18.48■□□□□ 0.55
PCDH1-201ENST00000287008 ADGRF1Q5T601 910 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CLEC20AQ6ZU45 233 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 CRYBG2Q8N1P7 616 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 SGK2Q9HBY8 427 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 COG5Q9UP83 839 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 TCAF1Q9Y4C2 921 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 SNX10Q9Y5X0 201 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF536O15090 1300 aa18.48■□□□□ 0.55
PCDH1-201ENST00000287008 AP3D1O14617 1153 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 MT-CYBP00156 380 aaPredicted RBP18.47■□□□□ 0.55
PCDH1-201ENST00000287008 ASPAP45381 313 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 RPS24P62847 133 aaKnown RBP18.47■□□□□ 0.55
PCDH1-201ENST00000287008 SLC34A1Q06495 639 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 ZNF605Q86T29 641 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 C10orf107Q8IVU9 208 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 OR52E6Q96RD3 313 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 TCF12Q99081 682 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 ERVK-5Q9HDB9 667 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 SLC25A12O75746 678 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 PFKMP08237 780 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 CD48P09326 243 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 FAM58BPP0C7Q3 252 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 MANFP55145 182 aaKnown RBP18.47■□□□□ 0.55
PCDH1-201ENST00000287008 STX4Q12846 297 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 SNX30Q5VWJ9 437 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 CPT1BQ92523 772 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 MFSD3Q96ES6 412 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 HAPLN3Q96S86 360 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 LMAN2LQ9H0V9 348 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 MTAPQ13126 283 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 SLC44A1Q8WWI5 657 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 TSSK3Q96PN8 268 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 LYVE1Q9Y5Y7 322 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 HLA-DQA2P01906 255 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 ITGA2P17301 1181 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 FSHRP23945 695 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 RPIAP49247 311 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 RABGGTBP53611 331 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 C9orf64Q5T6V5 341 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 APOLD1Q96LR9 279 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 SDCBP2Q9H190 292 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 MYOM1P52179 1685 aa18.47■□□□□ 0.55
PCDH1-201ENST00000287008 PDE9AO76083 593 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 BLKP51451 505 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TAF13Q15543 124 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 GDPD5Q8WTR4 605 aa18.46■□□□□ 0.55
PCDH1-201ENST00000287008 TLR6Q9Y2C9 796 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms